Protein–RNA interactions for Protein: Q60649

Clpb, Caseinolytic peptidase B protein homolog, mousemouse

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClpbQ60649 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC17.61■□□□□ 0.41
ClpbQ60649 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
ClpbQ60649 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
ClpbQ60649 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC17.61■□□□□ 0.41
ClpbQ60649 Nespas-201ENSMUST00000143738 1083 ntBASIC17.61■□□□□ 0.41
ClpbQ60649 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
ClpbQ60649 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC17.61■□□□□ 0.41
ClpbQ60649 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC17.61■□□□□ 0.41
ClpbQ60649 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
ClpbQ60649 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
ClpbQ60649 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
ClpbQ60649 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC17.61■□□□□ 0.41
ClpbQ60649 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
ClpbQ60649 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC17.61■□□□□ 0.41
ClpbQ60649 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
ClpbQ60649 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
ClpbQ60649 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
ClpbQ60649 Gm7290-201ENSMUST00000104990 617 ntBASIC17.6■□□□□ 0.41
ClpbQ60649 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
ClpbQ60649 Gm12918-201ENSMUST00000120234 636 ntBASIC17.6■□□□□ 0.41
ClpbQ60649 Gm15710-201ENSMUST00000121821 636 ntBASIC17.6■□□□□ 0.41
ClpbQ60649 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC17.6■□□□□ 0.41
ClpbQ60649 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
ClpbQ60649 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
ClpbQ60649 Gm5075-201ENSMUST00000196916 622 ntBASIC17.6■□□□□ 0.41
ClpbQ60649 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
ClpbQ60649 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC17.6■□□□□ 0.41
ClpbQ60649 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC17.6■□□□□ 0.41
ClpbQ60649 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
ClpbQ60649 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
ClpbQ60649 Gm7856-201ENSMUST00000117514 1493 ntBASIC17.6■□□□□ 0.41
ClpbQ60649 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
ClpbQ60649 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
ClpbQ60649 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
ClpbQ60649 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
ClpbQ60649 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
ClpbQ60649 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
ClpbQ60649 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
ClpbQ60649 Gm5953-201ENSMUST00000220644 2616 ntBASIC17.6■□□□□ 0.41
ClpbQ60649 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
ClpbQ60649 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
ClpbQ60649 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
ClpbQ60649 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
ClpbQ60649 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
ClpbQ60649 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
ClpbQ60649 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
ClpbQ60649 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
ClpbQ60649 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
ClpbQ60649 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC17.59■□□□□ 0.41
ClpbQ60649 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
ClpbQ60649 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
ClpbQ60649 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
ClpbQ60649 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
ClpbQ60649 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
ClpbQ60649 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
ClpbQ60649 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
ClpbQ60649 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.41
ClpbQ60649 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.41
ClpbQ60649 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
ClpbQ60649 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC17.58■□□□□ 0.4
ClpbQ60649 Gm6365-201ENSMUST00000054711 744 ntBASIC17.58■□□□□ 0.4
ClpbQ60649 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
ClpbQ60649 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
ClpbQ60649 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
ClpbQ60649 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
ClpbQ60649 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC17.58■□□□□ 0.4
ClpbQ60649 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
ClpbQ60649 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
ClpbQ60649 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC17.57■□□□□ 0.4
ClpbQ60649 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
ClpbQ60649 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
ClpbQ60649 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC17.57■□□□□ 0.4
ClpbQ60649 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
ClpbQ60649 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC17.57■□□□□ 0.4
ClpbQ60649 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
ClpbQ60649 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC17.57■□□□□ 0.4
ClpbQ60649 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
ClpbQ60649 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
ClpbQ60649 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
ClpbQ60649 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
ClpbQ60649 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC17.57■□□□□ 0.4
ClpbQ60649 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
ClpbQ60649 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
ClpbQ60649 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
ClpbQ60649 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC17.57■□□□□ 0.4
ClpbQ60649 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
ClpbQ60649 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
ClpbQ60649 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
ClpbQ60649 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
ClpbQ60649 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
ClpbQ60649 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
ClpbQ60649 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
ClpbQ60649 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC17.56■□□□□ 0.4
ClpbQ60649 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
ClpbQ60649 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
ClpbQ60649 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
ClpbQ60649 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
ClpbQ60649 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
ClpbQ60649 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
ClpbQ60649 Rarb-207ENSMUST00000225921 2756 ntBASIC17.56■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 111.4 ms