Protein–RNA interactions for Protein: Q5SWD9

Tsr1, Pre-rRNA-processing protein TSR1 homolog, mousemouse

Predictions only

Length 803 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tsr1Q5SWD9 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC19.72■□□□□ 0.75
Tsr1Q5SWD9 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC19.72■□□□□ 0.75
Tsr1Q5SWD9 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Tsr1Q5SWD9 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Tsr1Q5SWD9 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Tsr1Q5SWD9 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Tsr1Q5SWD9 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
Tsr1Q5SWD9 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
Tsr1Q5SWD9 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Tsr1Q5SWD9 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Tsr1Q5SWD9 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Tsr1Q5SWD9 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Tsr1Q5SWD9 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC19.71■□□□□ 0.75
Tsr1Q5SWD9 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Tsr1Q5SWD9 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC19.71■□□□□ 0.75
Tsr1Q5SWD9 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Tsr1Q5SWD9 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Tsr1Q5SWD9 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Tsr1Q5SWD9 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
Tsr1Q5SWD9 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Tsr1Q5SWD9 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Tsr1Q5SWD9 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Tsr1Q5SWD9 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
Tsr1Q5SWD9 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Tsr1Q5SWD9 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC19.7■□□□□ 0.74
Tsr1Q5SWD9 Smad6-203ENSMUST00000179458 273 ntBASIC19.7■□□□□ 0.74
Tsr1Q5SWD9 Gm26833-201ENSMUST00000180899 440 ntBASIC19.7■□□□□ 0.74
Tsr1Q5SWD9 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Tsr1Q5SWD9 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
Tsr1Q5SWD9 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Tsr1Q5SWD9 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Tsr1Q5SWD9 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Tsr1Q5SWD9 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC19.7■□□□□ 0.74
Tsr1Q5SWD9 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Tsr1Q5SWD9 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Tsr1Q5SWD9 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC19.69■□□□□ 0.74
Tsr1Q5SWD9 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Tsr1Q5SWD9 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Tsr1Q5SWD9 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Tsr1Q5SWD9 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Tsr1Q5SWD9 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Tsr1Q5SWD9 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Tsr1Q5SWD9 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC19.69■□□□□ 0.74
Tsr1Q5SWD9 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Tsr1Q5SWD9 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC19.69■□□□□ 0.74
Tsr1Q5SWD9 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Tsr1Q5SWD9 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Tsr1Q5SWD9 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC19.69■□□□□ 0.74
Tsr1Q5SWD9 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC19.69■□□□□ 0.74
Tsr1Q5SWD9 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC19.69■□□□□ 0.74
Tsr1Q5SWD9 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Tsr1Q5SWD9 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Tsr1Q5SWD9 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
Tsr1Q5SWD9 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Tsr1Q5SWD9 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Tsr1Q5SWD9 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
Tsr1Q5SWD9 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC19.68■□□□□ 0.74
Tsr1Q5SWD9 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC19.68■□□□□ 0.74
Tsr1Q5SWD9 AC121598.2-201ENSMUST00000228376 2325 ntBASIC19.68■□□□□ 0.74
Tsr1Q5SWD9 Fcho2-208ENSMUST00000224992 2964 ntBASIC19.68■□□□□ 0.74
Tsr1Q5SWD9 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Tsr1Q5SWD9 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Tsr1Q5SWD9 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Tsr1Q5SWD9 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC19.67■□□□□ 0.74
Tsr1Q5SWD9 Cdc34b-202ENSMUST00000188741 1252 ntBASIC19.67■□□□□ 0.74
Tsr1Q5SWD9 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Tsr1Q5SWD9 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC19.67■□□□□ 0.74
Tsr1Q5SWD9 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
Tsr1Q5SWD9 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC19.67■□□□□ 0.74
Tsr1Q5SWD9 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Tsr1Q5SWD9 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Tsr1Q5SWD9 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Tsr1Q5SWD9 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Tsr1Q5SWD9 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Tsr1Q5SWD9 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Tsr1Q5SWD9 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Tsr1Q5SWD9 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Tsr1Q5SWD9 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Tsr1Q5SWD9 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Tsr1Q5SWD9 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC19.67■□□□□ 0.74
Tsr1Q5SWD9 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
Tsr1Q5SWD9 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC19.66■□□□□ 0.74
Tsr1Q5SWD9 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Tsr1Q5SWD9 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Tsr1Q5SWD9 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Tsr1Q5SWD9 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC19.66■□□□□ 0.74
Tsr1Q5SWD9 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC19.66■□□□□ 0.74
Tsr1Q5SWD9 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Tsr1Q5SWD9 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Tsr1Q5SWD9 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Tsr1Q5SWD9 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Tsr1Q5SWD9 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Tsr1Q5SWD9 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
Tsr1Q5SWD9 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC19.66■□□□□ 0.74
Tsr1Q5SWD9 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC19.66■□□□□ 0.74
Tsr1Q5SWD9 AC165080.2-201ENSMUST00000217491 1530 ntBASIC19.66■□□□□ 0.74
Tsr1Q5SWD9 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Tsr1Q5SWD9 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Tsr1Q5SWD9 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Tsr1Q5SWD9 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 20.5 ms