Protein–RNA interactions for Protein: Q5R1I3

Trav7-2, T cell receptor alpha variable 7-2 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav7-2Q5R1I3 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC13.67□□□□□ -0.22
Trav7-2Q5R1I3 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav7-2Q5R1I3 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav7-2Q5R1I3 Gm19439-201ENSMUST00000198195 2273 ntBASIC13.67□□□□□ -0.22
Trav7-2Q5R1I3 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav7-2Q5R1I3 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Trav7-2Q5R1I3 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Trav7-2Q5R1I3 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav7-2Q5R1I3 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Trav7-2Q5R1I3 Gm32699-201ENSMUST00000221728 1988 ntBASIC13.67□□□□□ -0.22
Trav7-2Q5R1I3 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav7-2Q5R1I3 Gm5540-201ENSMUST00000131852 1848 ntBASIC13.67□□□□□ -0.22
Trav7-2Q5R1I3 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Trav7-2Q5R1I3 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav7-2Q5R1I3 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav7-2Q5R1I3 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Trav7-2Q5R1I3 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Trav7-2Q5R1I3 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav7-2Q5R1I3 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav7-2Q5R1I3 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav7-2Q5R1I3 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav7-2Q5R1I3 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Trav7-2Q5R1I3 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Trav7-2Q5R1I3 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Trav7-2Q5R1I3 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav7-2Q5R1I3 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Trav7-2Q5R1I3 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav7-2Q5R1I3 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC13.66□□□□□ -0.22
Trav7-2Q5R1I3 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC13.66□□□□□ -0.22
Trav7-2Q5R1I3 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav7-2Q5R1I3 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav7-2Q5R1I3 Gm44832-201ENSMUST00000208849 2303 ntBASIC13.65□□□□□ -0.22
Trav7-2Q5R1I3 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC13.65□□□□□ -0.22
Trav7-2Q5R1I3 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
Trav7-2Q5R1I3 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC13.65□□□□□ -0.22
Trav7-2Q5R1I3 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Trav7-2Q5R1I3 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav7-2Q5R1I3 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav7-2Q5R1I3 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC13.65□□□□□ -0.22
Trav7-2Q5R1I3 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Trav7-2Q5R1I3 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav7-2Q5R1I3 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav7-2Q5R1I3 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav7-2Q5R1I3 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC13.65□□□□□ -0.22
Trav7-2Q5R1I3 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav7-2Q5R1I3 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav7-2Q5R1I3 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC13.65□□□□□ -0.22
Trav7-2Q5R1I3 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC13.65□□□□□ -0.22
Trav7-2Q5R1I3 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav7-2Q5R1I3 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC13.65□□□□□ -0.22
Trav7-2Q5R1I3 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav7-2Q5R1I3 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav7-2Q5R1I3 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Trav7-2Q5R1I3 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav7-2Q5R1I3 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav7-2Q5R1I3 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav7-2Q5R1I3 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav7-2Q5R1I3 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav7-2Q5R1I3 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav7-2Q5R1I3 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav7-2Q5R1I3 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav7-2Q5R1I3 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC13.64□□□□□ -0.23
Trav7-2Q5R1I3 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Trav7-2Q5R1I3 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
Trav7-2Q5R1I3 CT030146.1-201ENSMUST00000220919 217 ntBASIC13.64□□□□□ -0.23
Trav7-2Q5R1I3 AC124603.1-201ENSMUST00000223843 308 ntBASIC13.64□□□□□ -0.23
Trav7-2Q5R1I3 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav7-2Q5R1I3 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav7-2Q5R1I3 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav7-2Q5R1I3 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav7-2Q5R1I3 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
Trav7-2Q5R1I3 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav7-2Q5R1I3 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav7-2Q5R1I3 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav7-2Q5R1I3 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav7-2Q5R1I3 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav7-2Q5R1I3 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC13.63□□□□□ -0.23
Trav7-2Q5R1I3 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav7-2Q5R1I3 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav7-2Q5R1I3 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Trav7-2Q5R1I3 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav7-2Q5R1I3 Gm7860-201ENSMUST00000121190 879 ntBASIC13.63□□□□□ -0.23
Trav7-2Q5R1I3 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav7-2Q5R1I3 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav7-2Q5R1I3 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav7-2Q5R1I3 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
Trav7-2Q5R1I3 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav7-2Q5R1I3 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
Trav7-2Q5R1I3 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav7-2Q5R1I3 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC13.63□□□□□ -0.23
Trav7-2Q5R1I3 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Trav7-2Q5R1I3 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav7-2Q5R1I3 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Trav7-2Q5R1I3 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC13.62□□□□□ -0.23
Trav7-2Q5R1I3 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Trav7-2Q5R1I3 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav7-2Q5R1I3 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC13.62□□□□□ -0.23
Trav7-2Q5R1I3 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Trav7-2Q5R1I3 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav7-2Q5R1I3 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 26.6 ms