Protein–RNA interactions for Protein: Q5R1E6

Trav6-3, T cell receptor alpha variable 6-3 (Fragment), mousemouse

Predictions only

Length 112 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-3Q5R1E6 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC14.8□□□□□ -0.04
Trav6-3Q5R1E6 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trav6-3Q5R1E6 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Trav6-3Q5R1E6 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC14.8□□□□□ -0.04
Trav6-3Q5R1E6 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trav6-3Q5R1E6 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trav6-3Q5R1E6 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trav6-3Q5R1E6 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC14.79□□□□□ -0.04
Trav6-3Q5R1E6 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trav6-3Q5R1E6 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC14.79□□□□□ -0.04
Trav6-3Q5R1E6 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC14.79□□□□□ -0.04
Trav6-3Q5R1E6 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC14.79□□□□□ -0.04
Trav6-3Q5R1E6 Rarb-207ENSMUST00000225921 2756 ntBASIC14.79□□□□□ -0.04
Trav6-3Q5R1E6 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Trav6-3Q5R1E6 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trav6-3Q5R1E6 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trav6-3Q5R1E6 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
Trav6-3Q5R1E6 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC14.79□□□□□ -0.04
Trav6-3Q5R1E6 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trav6-3Q5R1E6 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trav6-3Q5R1E6 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Trav6-3Q5R1E6 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trav6-3Q5R1E6 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Trav6-3Q5R1E6 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
Trav6-3Q5R1E6 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trav6-3Q5R1E6 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trav6-3Q5R1E6 Gm10167-201ENSMUST00000150411 1479 ntBASIC14.78□□□□□ -0.04
Trav6-3Q5R1E6 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trav6-3Q5R1E6 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
Trav6-3Q5R1E6 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trav6-3Q5R1E6 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Trav6-3Q5R1E6 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trav6-3Q5R1E6 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC14.78□□□□□ -0.04
Trav6-3Q5R1E6 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC14.78□□□□□ -0.04
Trav6-3Q5R1E6 Gm44832-201ENSMUST00000208849 2303 ntBASIC14.78□□□□□ -0.04
Trav6-3Q5R1E6 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Trav6-3Q5R1E6 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
Trav6-3Q5R1E6 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
Trav6-3Q5R1E6 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Trav6-3Q5R1E6 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.04
Trav6-3Q5R1E6 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Trav6-3Q5R1E6 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Trav6-3Q5R1E6 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.04
Trav6-3Q5R1E6 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.04
Trav6-3Q5R1E6 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC14.77□□□□□ -0.05
Trav6-3Q5R1E6 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Trav6-3Q5R1E6 Gm26971-201ENSMUST00000182423 1072 ntBASIC14.77□□□□□ -0.05
Trav6-3Q5R1E6 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC14.77□□□□□ -0.05
Trav6-3Q5R1E6 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Trav6-3Q5R1E6 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC14.77□□□□□ -0.05
Trav6-3Q5R1E6 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Trav6-3Q5R1E6 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Trav6-3Q5R1E6 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Trav6-3Q5R1E6 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC14.77□□□□□ -0.05
Trav6-3Q5R1E6 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Trav6-3Q5R1E6 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Trav6-3Q5R1E6 Dmtn-207ENSMUST00000228001 2437 ntBASIC14.76□□□□□ -0.05
Trav6-3Q5R1E6 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trav6-3Q5R1E6 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC14.76□□□□□ -0.05
Trav6-3Q5R1E6 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trav6-3Q5R1E6 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trav6-3Q5R1E6 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trav6-3Q5R1E6 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trav6-3Q5R1E6 Gm13146-201ENSMUST00000118508 780 ntBASIC14.76□□□□□ -0.05
Trav6-3Q5R1E6 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
Trav6-3Q5R1E6 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Trav6-3Q5R1E6 AC107452.1-201ENSMUST00000227963 481 ntBASIC14.76□□□□□ -0.05
Trav6-3Q5R1E6 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC14.76□□□□□ -0.05
Trav6-3Q5R1E6 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC14.76□□□□□ -0.05
Trav6-3Q5R1E6 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC14.76□□□□□ -0.05
Trav6-3Q5R1E6 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Trav6-3Q5R1E6 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trav6-3Q5R1E6 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
Trav6-3Q5R1E6 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trav6-3Q5R1E6 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trav6-3Q5R1E6 Gm8309-201ENSMUST00000206627 1448 ntBASIC14.75□□□□□ -0.05
Trav6-3Q5R1E6 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trav6-3Q5R1E6 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trav6-3Q5R1E6 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trav6-3Q5R1E6 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trav6-3Q5R1E6 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trav6-3Q5R1E6 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Trav6-3Q5R1E6 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC14.75□□□□□ -0.05
Trav6-3Q5R1E6 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC14.75□□□□□ -0.05
Trav6-3Q5R1E6 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC14.75□□□□□ -0.05
Trav6-3Q5R1E6 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trav6-3Q5R1E6 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
Trav6-3Q5R1E6 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trav6-3Q5R1E6 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Trav6-3Q5R1E6 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Trav6-3Q5R1E6 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
Trav6-3Q5R1E6 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trav6-3Q5R1E6 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trav6-3Q5R1E6 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trav6-3Q5R1E6 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trav6-3Q5R1E6 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC14.74□□□□□ -0.05
Trav6-3Q5R1E6 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trav6-3Q5R1E6 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trav6-3Q5R1E6 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trav6-3Q5R1E6 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 21.4 ms