Protein–RNA interactions for Protein: Q5R1B6

Trav8d-2, T cell receptor alpha variable 8D-2 (Fragment), mousemouse

Predictions only

Length 112 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8d-2Q5R1B6 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Trav8d-2Q5R1B6 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Trav8d-2Q5R1B6 Gm23634-201ENSMUST00000175071 91 ntBASIC18.01■□□□□ 0.47
Trav8d-2Q5R1B6 Inmt-201ENSMUST00000003569 1077 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Trav8d-2Q5R1B6 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Trav8d-2Q5R1B6 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Trav8d-2Q5R1B6 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Trav8d-2Q5R1B6 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC18■□□□□ 0.47
Trav8d-2Q5R1B6 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
Trav8d-2Q5R1B6 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC18■□□□□ 0.47
Trav8d-2Q5R1B6 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
Trav8d-2Q5R1B6 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC18■□□□□ 0.47
Trav8d-2Q5R1B6 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Trav8d-2Q5R1B6 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Trav8d-2Q5R1B6 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC18■□□□□ 0.47
Trav8d-2Q5R1B6 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
Trav8d-2Q5R1B6 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC18■□□□□ 0.47
Trav8d-2Q5R1B6 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Trav8d-2Q5R1B6 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Trav8d-2Q5R1B6 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Trav8d-2Q5R1B6 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Trav8d-2Q5R1B6 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Trav8d-2Q5R1B6 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Trav8d-2Q5R1B6 Gm27741-201ENSMUST00000185060 237 ntBASIC17.99■□□□□ 0.47
Trav8d-2Q5R1B6 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC17.99■□□□□ 0.47
Trav8d-2Q5R1B6 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Trav8d-2Q5R1B6 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Trav8d-2Q5R1B6 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Trav8d-2Q5R1B6 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Trav8d-2Q5R1B6 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Trav8d-2Q5R1B6 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Trav8d-2Q5R1B6 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Trav8d-2Q5R1B6 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC17.98■□□□□ 0.47
Trav8d-2Q5R1B6 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Trav8d-2Q5R1B6 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
Trav8d-2Q5R1B6 Gm10013-201ENSMUST00000106074 672 ntBASIC17.98■□□□□ 0.47
Trav8d-2Q5R1B6 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Trav8d-2Q5R1B6 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Trav8d-2Q5R1B6 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC17.98■□□□□ 0.47
Trav8d-2Q5R1B6 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC17.98■□□□□ 0.47
Trav8d-2Q5R1B6 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC17.98■□□□□ 0.47
Trav8d-2Q5R1B6 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Trav8d-2Q5R1B6 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Trav8d-2Q5R1B6 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC17.98■□□□□ 0.47
Trav8d-2Q5R1B6 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
Trav8d-2Q5R1B6 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Trav8d-2Q5R1B6 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC17.98■□□□□ 0.47
Trav8d-2Q5R1B6 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Trav8d-2Q5R1B6 Gm37352-201ENSMUST00000193908 2181 ntBASIC17.97■□□□□ 0.47
Trav8d-2Q5R1B6 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
Trav8d-2Q5R1B6 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Trav8d-2Q5R1B6 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
Trav8d-2Q5R1B6 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Trav8d-2Q5R1B6 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC17.97■□□□□ 0.47
Trav8d-2Q5R1B6 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC17.97■□□□□ 0.47
Trav8d-2Q5R1B6 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Trav8d-2Q5R1B6 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Trav8d-2Q5R1B6 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Trav8d-2Q5R1B6 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Trav8d-2Q5R1B6 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Trav8d-2Q5R1B6 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Trav8d-2Q5R1B6 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
Trav8d-2Q5R1B6 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Trav8d-2Q5R1B6 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
Trav8d-2Q5R1B6 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Trav8d-2Q5R1B6 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Trav8d-2Q5R1B6 AA414768-201ENSMUST00000121924 1257 ntBASIC17.96■□□□□ 0.47
Trav8d-2Q5R1B6 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Trav8d-2Q5R1B6 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC17.96■□□□□ 0.47
Trav8d-2Q5R1B6 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Trav8d-2Q5R1B6 AC166341.7-201ENSMUST00000221698 126 ntBASIC17.96■□□□□ 0.47
Trav8d-2Q5R1B6 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Trav8d-2Q5R1B6 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
Trav8d-2Q5R1B6 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
Trav8d-2Q5R1B6 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Trav8d-2Q5R1B6 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Trav8d-2Q5R1B6 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Trav8d-2Q5R1B6 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Trav8d-2Q5R1B6 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
Trav8d-2Q5R1B6 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC17.95■□□□□ 0.46
Trav8d-2Q5R1B6 Gm10517-202ENSMUST00000192970 758 ntBASIC17.95■□□□□ 0.46
Trav8d-2Q5R1B6 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Trav8d-2Q5R1B6 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Trav8d-2Q5R1B6 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Trav8d-2Q5R1B6 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Trav8d-2Q5R1B6 Gm13042-201ENSMUST00000119244 1955 ntBASIC17.95■□□□□ 0.46
Trav8d-2Q5R1B6 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Trav8d-2Q5R1B6 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Trav8d-2Q5R1B6 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Trav8d-2Q5R1B6 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
Trav8d-2Q5R1B6 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC17.94■□□□□ 0.46
Trav8d-2Q5R1B6 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Trav8d-2Q5R1B6 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC17.94■□□□□ 0.46
Trav8d-2Q5R1B6 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC17.94■□□□□ 0.46
Trav8d-2Q5R1B6 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Trav8d-2Q5R1B6 Gm27463-201ENSMUST00000183569 57 ntBASIC17.94■□□□□ 0.46
Trav8d-2Q5R1B6 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
Trav8d-2Q5R1B6 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Trav8d-2Q5R1B6 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Trav8d-2Q5R1B6 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 47.8 ms