Protein–RNA interactions for Protein: Q5QNQ9

Col27a1, Collagen alpha-1(XXVII) chain, mousemouse

Predictions only

Length 1,845 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col27a1Q5QNQ9 Gm4217-201ENSMUST00000182243 1002 ntBASIC17.99■□□□□ 0.47
Col27a1Q5QNQ9 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC17.99■□□□□ 0.47
Col27a1Q5QNQ9 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
Col27a1Q5QNQ9 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Col27a1Q5QNQ9 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Col27a1Q5QNQ9 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Col27a1Q5QNQ9 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
Col27a1Q5QNQ9 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC17.98■□□□□ 0.47
Col27a1Q5QNQ9 Gm2274-201ENSMUST00000184539 609 ntBASIC17.98■□□□□ 0.47
Col27a1Q5QNQ9 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
Col27a1Q5QNQ9 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
Col27a1Q5QNQ9 Gm44544-201ENSMUST00000207052 1844 ntBASIC17.98■□□□□ 0.47
Col27a1Q5QNQ9 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Col27a1Q5QNQ9 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Col27a1Q5QNQ9 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Col27a1Q5QNQ9 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Col27a1Q5QNQ9 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Col27a1Q5QNQ9 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC17.98■□□□□ 0.47
Col27a1Q5QNQ9 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
Col27a1Q5QNQ9 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC17.98■□□□□ 0.47
Col27a1Q5QNQ9 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Col27a1Q5QNQ9 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Col27a1Q5QNQ9 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
Col27a1Q5QNQ9 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Col27a1Q5QNQ9 Gm13042-201ENSMUST00000119244 1955 ntBASIC17.97■□□□□ 0.47
Col27a1Q5QNQ9 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
Col27a1Q5QNQ9 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Col27a1Q5QNQ9 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
Col27a1Q5QNQ9 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Col27a1Q5QNQ9 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
Col27a1Q5QNQ9 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Col27a1Q5QNQ9 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC17.97■□□□□ 0.47
Col27a1Q5QNQ9 Gm5587-201ENSMUST00000206270 674 ntBASIC17.97■□□□□ 0.47
Col27a1Q5QNQ9 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC17.97■□□□□ 0.47
Col27a1Q5QNQ9 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Col27a1Q5QNQ9 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Col27a1Q5QNQ9 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC17.97■□□□□ 0.47
Col27a1Q5QNQ9 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Col27a1Q5QNQ9 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
Col27a1Q5QNQ9 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
Col27a1Q5QNQ9 Gm10654-201ENSMUST00000098653 1633 ntBASIC17.96■□□□□ 0.47
Col27a1Q5QNQ9 Gm27704-201ENSMUST00000185094 107 ntBASIC17.96■□□□□ 0.47
Col27a1Q5QNQ9 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
Col27a1Q5QNQ9 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Col27a1Q5QNQ9 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Col27a1Q5QNQ9 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Col27a1Q5QNQ9 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Col27a1Q5QNQ9 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
Col27a1Q5QNQ9 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC17.96■□□□□ 0.46
Col27a1Q5QNQ9 Mir2861-201ENSMUST00000175539 82 ntBASIC17.95■□□□□ 0.46
Col27a1Q5QNQ9 Gm31727-201ENSMUST00000210102 360 ntTSL 3 BASIC17.95■□□□□ 0.46
Col27a1Q5QNQ9 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC17.95■□□□□ 0.46
Col27a1Q5QNQ9 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Col27a1Q5QNQ9 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Col27a1Q5QNQ9 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
Col27a1Q5QNQ9 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Col27a1Q5QNQ9 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Col27a1Q5QNQ9 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Col27a1Q5QNQ9 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
Col27a1Q5QNQ9 Gm45640-201ENSMUST00000210665 1896 ntBASIC17.95■□□□□ 0.46
Col27a1Q5QNQ9 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
Col27a1Q5QNQ9 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Col27a1Q5QNQ9 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Col27a1Q5QNQ9 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC17.95■□□□□ 0.46
Col27a1Q5QNQ9 Gm16061-201ENSMUST00000122167 857 ntBASIC17.95■□□□□ 0.46
Col27a1Q5QNQ9 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Col27a1Q5QNQ9 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Col27a1Q5QNQ9 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
Col27a1Q5QNQ9 Gm9013-201ENSMUST00000132939 882 ntBASIC17.94■□□□□ 0.46
Col27a1Q5QNQ9 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC17.94■□□□□ 0.46
Col27a1Q5QNQ9 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Col27a1Q5QNQ9 Gm18669-201ENSMUST00000216049 778 ntBASIC17.94■□□□□ 0.46
Col27a1Q5QNQ9 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC17.94■□□□□ 0.46
Col27a1Q5QNQ9 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Col27a1Q5QNQ9 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Col27a1Q5QNQ9 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Col27a1Q5QNQ9 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Col27a1Q5QNQ9 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC17.94■□□□□ 0.46
Col27a1Q5QNQ9 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
Col27a1Q5QNQ9 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC17.93■□□□□ 0.46
Col27a1Q5QNQ9 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
Col27a1Q5QNQ9 Gm25016-201ENSMUST00000158399 131 ntBASIC17.93■□□□□ 0.46
Col27a1Q5QNQ9 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Col27a1Q5QNQ9 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Col27a1Q5QNQ9 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Col27a1Q5QNQ9 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Col27a1Q5QNQ9 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
Col27a1Q5QNQ9 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Col27a1Q5QNQ9 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Col27a1Q5QNQ9 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Col27a1Q5QNQ9 Nat8f3-202ENSMUST00000168531 1347 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Col27a1Q5QNQ9 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
Col27a1Q5QNQ9 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Col27a1Q5QNQ9 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC17.93■□□□□ 0.46
Col27a1Q5QNQ9 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Col27a1Q5QNQ9 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Col27a1Q5QNQ9 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
Col27a1Q5QNQ9 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Col27a1Q5QNQ9 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Col27a1Q5QNQ9 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 74.7 ms