Protein–RNA interactions for Protein: Q5NCP0

Rnf43, E3 ubiquitin-protein ligase RNF43, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf43Q5NCP0 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
Rnf43Q5NCP0 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Rnf43Q5NCP0 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Rnf43Q5NCP0 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Rnf43Q5NCP0 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Rnf43Q5NCP0 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
Rnf43Q5NCP0 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Rnf43Q5NCP0 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC18.74■□□□□ 0.59
Rnf43Q5NCP0 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Rnf43Q5NCP0 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Rnf43Q5NCP0 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Rnf43Q5NCP0 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC18.74■□□□□ 0.59
Rnf43Q5NCP0 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
Rnf43Q5NCP0 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC18.74■□□□□ 0.59
Rnf43Q5NCP0 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Rnf43Q5NCP0 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Rnf43Q5NCP0 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Rnf43Q5NCP0 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
Rnf43Q5NCP0 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC18.74■□□□□ 0.59
Rnf43Q5NCP0 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Rnf43Q5NCP0 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Rnf43Q5NCP0 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Rnf43Q5NCP0 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC18.73■□□□□ 0.59
Rnf43Q5NCP0 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
Rnf43Q5NCP0 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Rnf43Q5NCP0 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Rnf43Q5NCP0 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Rnf43Q5NCP0 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC18.73■□□□□ 0.59
Rnf43Q5NCP0 Gm20472-201ENSMUST00000174403 1240 ntBASIC18.73■□□□□ 0.59
Rnf43Q5NCP0 AC107452.1-201ENSMUST00000227963 481 ntBASIC18.73■□□□□ 0.59
Rnf43Q5NCP0 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Rnf43Q5NCP0 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Rnf43Q5NCP0 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Rnf43Q5NCP0 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Rnf43Q5NCP0 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Rnf43Q5NCP0 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Rnf43Q5NCP0 Gm45640-201ENSMUST00000210665 1896 ntBASIC18.73■□□□□ 0.59
Rnf43Q5NCP0 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Rnf43Q5NCP0 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Rnf43Q5NCP0 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Rnf43Q5NCP0 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Rnf43Q5NCP0 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
Rnf43Q5NCP0 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Rnf43Q5NCP0 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Rnf43Q5NCP0 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Rnf43Q5NCP0 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Rnf43Q5NCP0 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Rnf43Q5NCP0 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Rnf43Q5NCP0 Gm6433-201ENSMUST00000118634 875 ntBASIC18.72■□□□□ 0.59
Rnf43Q5NCP0 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
Rnf43Q5NCP0 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC18.72■□□□□ 0.59
Rnf43Q5NCP0 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Rnf43Q5NCP0 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
Rnf43Q5NCP0 AC153881.2-201ENSMUST00000214877 204 ntBASIC18.72■□□□□ 0.59
Rnf43Q5NCP0 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Rnf43Q5NCP0 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Rnf43Q5NCP0 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Rnf43Q5NCP0 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
Rnf43Q5NCP0 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC18.72■□□□□ 0.59
Rnf43Q5NCP0 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Rnf43Q5NCP0 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Rnf43Q5NCP0 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
Rnf43Q5NCP0 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Rnf43Q5NCP0 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Rnf43Q5NCP0 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Rnf43Q5NCP0 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC18.71■□□□□ 0.59
Rnf43Q5NCP0 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC18.71■□□□□ 0.59
Rnf43Q5NCP0 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Rnf43Q5NCP0 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Rnf43Q5NCP0 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Rnf43Q5NCP0 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC18.71■□□□□ 0.59
Rnf43Q5NCP0 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
Rnf43Q5NCP0 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Rnf43Q5NCP0 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Rnf43Q5NCP0 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.58
Rnf43Q5NCP0 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Rnf43Q5NCP0 Hsf1-204ENSMUST00000226872 2104 ntBASIC18.7■□□□□ 0.58
Rnf43Q5NCP0 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC18.7■□□□□ 0.58
Rnf43Q5NCP0 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Rnf43Q5NCP0 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Rnf43Q5NCP0 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Rnf43Q5NCP0 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Rnf43Q5NCP0 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Rnf43Q5NCP0 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC18.7■□□□□ 0.58
Rnf43Q5NCP0 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Rnf43Q5NCP0 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Rnf43Q5NCP0 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Rnf43Q5NCP0 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
Rnf43Q5NCP0 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC18.69■□□□□ 0.58
Rnf43Q5NCP0 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Rnf43Q5NCP0 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Rnf43Q5NCP0 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Rnf43Q5NCP0 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Rnf43Q5NCP0 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Rnf43Q5NCP0 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC18.68■□□□□ 0.58
Rnf43Q5NCP0 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Rnf43Q5NCP0 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Rnf43Q5NCP0 Gm10231-201ENSMUST00000181584 441 ntBASIC18.68■□□□□ 0.58
Rnf43Q5NCP0 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Rnf43Q5NCP0 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC18.68■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 28.3 ms