Protein–RNA interactions for Protein: Q5H8B9

Frem3, FRAS1-related extracellular matrix protein 3, mousemouse

Predictions only

Length 2,123 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Frem3Q5H8B9 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Frem3Q5H8B9 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Frem3Q5H8B9 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
Frem3Q5H8B9 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Frem3Q5H8B9 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Frem3Q5H8B9 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC18.71■□□□□ 0.59
Frem3Q5H8B9 Gm11539-201ENSMUST00000119837 557 ntBASIC18.71■□□□□ 0.59
Frem3Q5H8B9 Gm13436-201ENSMUST00000120418 567 ntBASIC18.71■□□□□ 0.59
Frem3Q5H8B9 Gm13559-201ENSMUST00000120476 863 ntBASIC18.71■□□□□ 0.59
Frem3Q5H8B9 Mir6349-201ENSMUST00000184059 97 ntBASIC18.71■□□□□ 0.59
Frem3Q5H8B9 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC18.71■□□□□ 0.59
Frem3Q5H8B9 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC18.71■□□□□ 0.59
Frem3Q5H8B9 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Frem3Q5H8B9 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
Frem3Q5H8B9 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Frem3Q5H8B9 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Frem3Q5H8B9 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Frem3Q5H8B9 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC18.71■□□□□ 0.59
Frem3Q5H8B9 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
Frem3Q5H8B9 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Frem3Q5H8B9 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Frem3Q5H8B9 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Frem3Q5H8B9 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
Frem3Q5H8B9 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC18.71■□□□□ 0.59
Frem3Q5H8B9 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC18.71■□□□□ 0.59
Frem3Q5H8B9 Gm6659-201ENSMUST00000174752 547 ntBASIC18.71■□□□□ 0.59
Frem3Q5H8B9 Gm30025-201ENSMUST00000218555 728 ntBASIC18.71■□□□□ 0.59
Frem3Q5H8B9 Gm18688-201ENSMUST00000204695 1859 ntBASIC18.71■□□□□ 0.59
Frem3Q5H8B9 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC18.7■□□□□ 0.58
Frem3Q5H8B9 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Frem3Q5H8B9 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Frem3Q5H8B9 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
Frem3Q5H8B9 Gm37292-201ENSMUST00000192062 758 ntBASIC18.7■□□□□ 0.58
Frem3Q5H8B9 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Frem3Q5H8B9 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
Frem3Q5H8B9 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC18.7■□□□□ 0.58
Frem3Q5H8B9 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC18.7■□□□□ 0.58
Frem3Q5H8B9 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Frem3Q5H8B9 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
Frem3Q5H8B9 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC18.7■□□□□ 0.58
Frem3Q5H8B9 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Frem3Q5H8B9 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC18.7■□□□□ 0.58
Frem3Q5H8B9 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Frem3Q5H8B9 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Frem3Q5H8B9 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Frem3Q5H8B9 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Frem3Q5H8B9 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
Frem3Q5H8B9 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC18.69■□□□□ 0.58
Frem3Q5H8B9 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC18.69■□□□□ 0.58
Frem3Q5H8B9 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Frem3Q5H8B9 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Frem3Q5H8B9 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Frem3Q5H8B9 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Frem3Q5H8B9 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC18.69■□□□□ 0.58
Frem3Q5H8B9 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
Frem3Q5H8B9 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC18.69■□□□□ 0.58
Frem3Q5H8B9 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Frem3Q5H8B9 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Frem3Q5H8B9 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC18.68■□□□□ 0.58
Frem3Q5H8B9 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
Frem3Q5H8B9 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Frem3Q5H8B9 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Frem3Q5H8B9 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC18.68■□□□□ 0.58
Frem3Q5H8B9 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
Frem3Q5H8B9 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC18.68■□□□□ 0.58
Frem3Q5H8B9 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
Frem3Q5H8B9 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Frem3Q5H8B9 Gm7712-202ENSMUST00000222331 1510 ntBASIC18.68■□□□□ 0.58
Frem3Q5H8B9 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
Frem3Q5H8B9 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Frem3Q5H8B9 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC18.68■□□□□ 0.58
Frem3Q5H8B9 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Frem3Q5H8B9 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Frem3Q5H8B9 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Frem3Q5H8B9 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Frem3Q5H8B9 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC18.67■□□□□ 0.58
Frem3Q5H8B9 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
Frem3Q5H8B9 Gm38285-201ENSMUST00000192928 922 ntBASIC18.67■□□□□ 0.58
Frem3Q5H8B9 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Frem3Q5H8B9 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Frem3Q5H8B9 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC18.67■□□□□ 0.58
Frem3Q5H8B9 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Frem3Q5H8B9 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Frem3Q5H8B9 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Frem3Q5H8B9 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Frem3Q5H8B9 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Frem3Q5H8B9 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Frem3Q5H8B9 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC18.67■□□□□ 0.58
Frem3Q5H8B9 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Frem3Q5H8B9 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Frem3Q5H8B9 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC18.67■□□□□ 0.58
Frem3Q5H8B9 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Frem3Q5H8B9 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Frem3Q5H8B9 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Frem3Q5H8B9 Otx2os1-204ENSMUST00000227221 751 ntBASIC18.66■□□□□ 0.58
Frem3Q5H8B9 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Frem3Q5H8B9 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Frem3Q5H8B9 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Frem3Q5H8B9 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Frem3Q5H8B9 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 21.3 ms