Protein–RNA interactions for Protein: Q5DTM8

Rnf20, E3 ubiquitin-protein ligase BRE1A, mousemouse

Predictions only

Length 973 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf20Q5DTM8 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC21.91■■□□□ 1.1
Rnf20Q5DTM8 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Rnf20Q5DTM8 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
Rnf20Q5DTM8 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
Rnf20Q5DTM8 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC21.91■■□□□ 1.1
Rnf20Q5DTM8 Nespas-201ENSMUST00000143738 1083 ntBASIC21.91■■□□□ 1.1
Rnf20Q5DTM8 Gm43213-201ENSMUST00000151866 1790 ntBASIC21.91■■□□□ 1.1
Rnf20Q5DTM8 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Rnf20Q5DTM8 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
Rnf20Q5DTM8 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Rnf20Q5DTM8 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC21.9■■□□□ 1.1
Rnf20Q5DTM8 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC21.9■■□□□ 1.1
Rnf20Q5DTM8 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC21.9■■□□□ 1.1
Rnf20Q5DTM8 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
Rnf20Q5DTM8 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC21.9■■□□□ 1.1
Rnf20Q5DTM8 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC21.9■■□□□ 1.1
Rnf20Q5DTM8 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Rnf20Q5DTM8 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Rnf20Q5DTM8 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
Rnf20Q5DTM8 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Rnf20Q5DTM8 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC21.9■■□□□ 1.1
Rnf20Q5DTM8 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC21.89■■□□□ 1.1
Rnf20Q5DTM8 Gm42922-201ENSMUST00000195887 2078 ntBASIC21.89■■□□□ 1.1
Rnf20Q5DTM8 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
Rnf20Q5DTM8 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
Rnf20Q5DTM8 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Rnf20Q5DTM8 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Rnf20Q5DTM8 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC21.89■■□□□ 1.09
Rnf20Q5DTM8 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
Rnf20Q5DTM8 Gm37805-201ENSMUST00000192612 1094 ntBASIC21.89■■□□□ 1.09
Rnf20Q5DTM8 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC21.89■■□□□ 1.09
Rnf20Q5DTM8 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Rnf20Q5DTM8 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC21.89■■□□□ 1.09
Rnf20Q5DTM8 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Rnf20Q5DTM8 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Rnf20Q5DTM8 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
Rnf20Q5DTM8 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Rnf20Q5DTM8 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Rnf20Q5DTM8 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC21.88■■□□□ 1.09
Rnf20Q5DTM8 Gm8495-201ENSMUST00000188740 694 ntBASIC21.88■■□□□ 1.09
Rnf20Q5DTM8 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC21.88■■□□□ 1.09
Rnf20Q5DTM8 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC21.88■■□□□ 1.09
Rnf20Q5DTM8 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC21.88■■□□□ 1.09
Rnf20Q5DTM8 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC21.87■■□□□ 1.09
Rnf20Q5DTM8 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Rnf20Q5DTM8 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Rnf20Q5DTM8 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC21.87■■□□□ 1.09
Rnf20Q5DTM8 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Rnf20Q5DTM8 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC21.87■■□□□ 1.09
Rnf20Q5DTM8 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Rnf20Q5DTM8 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Rnf20Q5DTM8 Gm9194-201ENSMUST00000220749 1447 ntBASIC21.87■■□□□ 1.09
Rnf20Q5DTM8 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
Rnf20Q5DTM8 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC21.86■■□□□ 1.09
Rnf20Q5DTM8 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
Rnf20Q5DTM8 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
Rnf20Q5DTM8 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC21.86■■□□□ 1.09
Rnf20Q5DTM8 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC21.86■■□□□ 1.09
Rnf20Q5DTM8 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Rnf20Q5DTM8 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Rnf20Q5DTM8 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
Rnf20Q5DTM8 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Rnf20Q5DTM8 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Rnf20Q5DTM8 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC21.85■■□□□ 1.09
Rnf20Q5DTM8 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC21.85■■□□□ 1.09
Rnf20Q5DTM8 AC107452.1-201ENSMUST00000227963 481 ntBASIC21.85■■□□□ 1.09
Rnf20Q5DTM8 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Rnf20Q5DTM8 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Rnf20Q5DTM8 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Rnf20Q5DTM8 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Rnf20Q5DTM8 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Rnf20Q5DTM8 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Rnf20Q5DTM8 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Rnf20Q5DTM8 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
Rnf20Q5DTM8 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC21.84■■□□□ 1.09
Rnf20Q5DTM8 Gm10849-201ENSMUST00000100397 618 ntBASIC21.84■■□□□ 1.09
Rnf20Q5DTM8 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC21.84■■□□□ 1.09
Rnf20Q5DTM8 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Rnf20Q5DTM8 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
Rnf20Q5DTM8 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Rnf20Q5DTM8 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC21.84■■□□□ 1.09
Rnf20Q5DTM8 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC21.84■■□□□ 1.09
Rnf20Q5DTM8 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC21.84■■□□□ 1.09
Rnf20Q5DTM8 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC21.84■■□□□ 1.09
Rnf20Q5DTM8 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC21.84■■□□□ 1.09
Rnf20Q5DTM8 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Rnf20Q5DTM8 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Rnf20Q5DTM8 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Rnf20Q5DTM8 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
Rnf20Q5DTM8 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC21.83■■□□□ 1.09
Rnf20Q5DTM8 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Rnf20Q5DTM8 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
Rnf20Q5DTM8 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
Rnf20Q5DTM8 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Rnf20Q5DTM8 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
Rnf20Q5DTM8 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC21.82■■□□□ 1.08
Rnf20Q5DTM8 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
Rnf20Q5DTM8 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Rnf20Q5DTM8 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Rnf20Q5DTM8 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
Retrieved 100 of 76,532 protein–RNA pairs in 17.9 ms