Protein–RNA interactions for Protein: Q4U2R1

Herc2, E3 ubiquitin-protein ligase HERC2, mousemouse

Predictions only

Length 4,836 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Herc2Q4U2R1 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Herc2Q4U2R1 Bag2-203ENSMUST00000187602 378 ntTSL 2 BASIC11.08□□□□□ -0.64
Herc2Q4U2R1 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Herc2Q4U2R1 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Herc2Q4U2R1 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Herc2Q4U2R1 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC11.08□□□□□ -0.64
Herc2Q4U2R1 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Herc2Q4U2R1 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Herc2Q4U2R1 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Herc2Q4U2R1 Pard6a-204ENSMUST00000212352 1234 ntTSL 2 BASIC11.08□□□□□ -0.64
Herc2Q4U2R1 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Herc2Q4U2R1 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Herc2Q4U2R1 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC11.08□□□□□ -0.64
Herc2Q4U2R1 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC11.08□□□□□ -0.64
Herc2Q4U2R1 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Herc2Q4U2R1 Gm32699-201ENSMUST00000221728 1988 ntBASIC11.07□□□□□ -0.64
Herc2Q4U2R1 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC11.07□□□□□ -0.64
Herc2Q4U2R1 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Herc2Q4U2R1 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Herc2Q4U2R1 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC11.07□□□□□ -0.64
Herc2Q4U2R1 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Herc2Q4U2R1 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC11.07□□□□□ -0.64
Herc2Q4U2R1 Rplp2-203ENSMUST00000106004 421 ntAPPRIS P1 TSL 2 BASIC11.07□□□□□ -0.64
Herc2Q4U2R1 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC11.07□□□□□ -0.64
Herc2Q4U2R1 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC11.07□□□□□ -0.64
Herc2Q4U2R1 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Herc2Q4U2R1 Rbpms-202ENSMUST00000033995 1039 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Herc2Q4U2R1 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC11.07□□□□□ -0.64
Herc2Q4U2R1 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Herc2Q4U2R1 Gm20100-201ENSMUST00000209418 2272 ntBASIC11.06□□□□□ -0.64
Herc2Q4U2R1 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Herc2Q4U2R1 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Herc2Q4U2R1 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Herc2Q4U2R1 Cnn2-202ENSMUST00000105374 926 ntTSL 5 BASIC11.06□□□□□ -0.64
Herc2Q4U2R1 Celrr-203ENSMUST00000185678 937 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Herc2Q4U2R1 Gm34030-202ENSMUST00000211434 1126 ntTSL 5 BASIC11.06□□□□□ -0.64
Herc2Q4U2R1 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Herc2Q4U2R1 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Herc2Q4U2R1 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Herc2Q4U2R1 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Herc2Q4U2R1 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Herc2Q4U2R1 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC11.06□□□□□ -0.64
Herc2Q4U2R1 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Herc2Q4U2R1 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Herc2Q4U2R1 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Herc2Q4U2R1 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Herc2Q4U2R1 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Herc2Q4U2R1 Gm11860-201ENSMUST00000122346 1010 ntBASIC11.06□□□□□ -0.64
Herc2Q4U2R1 Edf1-201ENSMUST00000015236 722 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Herc2Q4U2R1 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Herc2Q4U2R1 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC11.06□□□□□ -0.64
Herc2Q4U2R1 Timm13-201ENSMUST00000020440 1225 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Herc2Q4U2R1 Gm32050-201ENSMUST00000209793 638 ntTSL 3 BASIC11.06□□□□□ -0.64
Herc2Q4U2R1 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Herc2Q4U2R1 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Herc2Q4U2R1 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Herc2Q4U2R1 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Herc2Q4U2R1 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Herc2Q4U2R1 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Herc2Q4U2R1 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Herc2Q4U2R1 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Herc2Q4U2R1 Gm8000-201ENSMUST00000188378 592 ntBASIC11.05□□□□□ -0.64
Herc2Q4U2R1 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC11.05□□□□□ -0.64
Herc2Q4U2R1 Hist1h2bg-201ENSMUST00000079251 618 ntAPPRIS P1 BASIC11.05□□□□□ -0.64
Herc2Q4U2R1 Hist1h2bn-201ENSMUST00000091709 381 ntAPPRIS P1 BASIC11.05□□□□□ -0.64
Herc2Q4U2R1 Gm15794-201ENSMUST00000120182 631 ntBASIC11.05□□□□□ -0.64
Herc2Q4U2R1 Qdpr-204ENSMUST00000120867 1234 ntTSL 5 BASIC11.05□□□□□ -0.64
Herc2Q4U2R1 Tsen15-205ENSMUST00000162371 431 ntTSL 5 BASIC11.05□□□□□ -0.64
Herc2Q4U2R1 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC11.05□□□□□ -0.64
Herc2Q4U2R1 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC11.05□□□□□ -0.64
Herc2Q4U2R1 Ppib-201ENSMUST00000034947 892 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Herc2Q4U2R1 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Herc2Q4U2R1 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC11.05□□□□□ -0.64
Herc2Q4U2R1 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Herc2Q4U2R1 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC11.05□□□□□ -0.64
Herc2Q4U2R1 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Herc2Q4U2R1 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC11.05□□□□□ -0.64
Herc2Q4U2R1 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Herc2Q4U2R1 Olfr129-201ENSMUST00000122318 993 ntBASIC11.05□□□□□ -0.64
Herc2Q4U2R1 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC11.05□□□□□ -0.64
Herc2Q4U2R1 AC160393.1-201ENSMUST00000218378 1279 ntBASIC11.05□□□□□ -0.64
Herc2Q4U2R1 Sult2b1-201ENSMUST00000075571 1193 ntAPPRIS P2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Herc2Q4U2R1 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Herc2Q4U2R1 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC11.05□□□□□ -0.64
Herc2Q4U2R1 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC11.04□□□□□ -0.64
Herc2Q4U2R1 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC11.04□□□□□ -0.64
Herc2Q4U2R1 Rfesd-203ENSMUST00000179078 1436 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Herc2Q4U2R1 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC11.04□□□□□ -0.64
Herc2Q4U2R1 Gm10418-201ENSMUST00000100943 576 ntBASIC11.04□□□□□ -0.64
Herc2Q4U2R1 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Herc2Q4U2R1 Gm8097-201ENSMUST00000117903 829 ntBASIC11.04□□□□□ -0.64
Herc2Q4U2R1 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC11.04□□□□□ -0.64
Herc2Q4U2R1 Gm20481-201ENSMUST00000173680 564 ntAPPRIS P1 TSL 3 BASIC11.04□□□□□ -0.64
Herc2Q4U2R1 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Herc2Q4U2R1 Gm27389-201ENSMUST00000183622 195 ntBASIC11.04□□□□□ -0.64
Herc2Q4U2R1 Gm45669-201ENSMUST00000209808 459 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Herc2Q4U2R1 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Herc2Q4U2R1 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Herc2Q4U2R1 Flot1-209ENSMUST00000174080 1383 ntTSL 5 BASIC11.04□□□□□ -0.64
Herc2Q4U2R1 Taf3-202ENSMUST00000114906 583 ntTSL 2 BASIC11.04□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 27.5 ms