Protein–RNA interactions for Protein: Q3USH1

Fam196a, Protein FAM196A, mousemouse

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fam196aQ3USH1 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Fam196aQ3USH1 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Fam196aQ3USH1 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Fam196aQ3USH1 Gm17661-201ENSMUST00000170317 270 ntBASIC18.53■□□□□ 0.56
Fam196aQ3USH1 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC18.53■□□□□ 0.56
Fam196aQ3USH1 Gm31727-201ENSMUST00000210102 360 ntTSL 3 BASIC18.53■□□□□ 0.56
Fam196aQ3USH1 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Fam196aQ3USH1 AC154471.1-201ENSMUST00000224418 436 ntBASIC18.53■□□□□ 0.56
Fam196aQ3USH1 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Fam196aQ3USH1 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
Fam196aQ3USH1 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Fam196aQ3USH1 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Fam196aQ3USH1 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Fam196aQ3USH1 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Fam196aQ3USH1 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Fam196aQ3USH1 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Fam196aQ3USH1 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Fam196aQ3USH1 9130024F11Rik-201ENSMUST00000135238 1300 ntTSL 2 BASIC18.52■□□□□ 0.56
Fam196aQ3USH1 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC18.52■□□□□ 0.56
Fam196aQ3USH1 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
Fam196aQ3USH1 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
Fam196aQ3USH1 Gm22697-201ENSMUST00000175194 63 ntBASIC18.52■□□□□ 0.56
Fam196aQ3USH1 Gm44771-201ENSMUST00000206975 626 ntBASIC18.52■□□□□ 0.56
Fam196aQ3USH1 AC134329.2-201ENSMUST00000217897 428 ntBASIC18.52■□□□□ 0.56
Fam196aQ3USH1 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Fam196aQ3USH1 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC18.52■□□□□ 0.56
Fam196aQ3USH1 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Fam196aQ3USH1 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
Fam196aQ3USH1 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.55
Fam196aQ3USH1 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Fam196aQ3USH1 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Fam196aQ3USH1 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Fam196aQ3USH1 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Fam196aQ3USH1 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Fam196aQ3USH1 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Fam196aQ3USH1 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Fam196aQ3USH1 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
Fam196aQ3USH1 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Fam196aQ3USH1 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Fam196aQ3USH1 Gm25925-201ENSMUST00000158314 306 ntBASIC18.51■□□□□ 0.55
Fam196aQ3USH1 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Fam196aQ3USH1 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC18.51■□□□□ 0.55
Fam196aQ3USH1 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC18.51■□□□□ 0.55
Fam196aQ3USH1 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Fam196aQ3USH1 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Fam196aQ3USH1 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Fam196aQ3USH1 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Fam196aQ3USH1 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
Fam196aQ3USH1 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Fam196aQ3USH1 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Fam196aQ3USH1 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
Fam196aQ3USH1 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Fam196aQ3USH1 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Fam196aQ3USH1 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Fam196aQ3USH1 Gm2274-201ENSMUST00000184539 609 ntBASIC18.5■□□□□ 0.55
Fam196aQ3USH1 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Fam196aQ3USH1 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Fam196aQ3USH1 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC18.5■□□□□ 0.55
Fam196aQ3USH1 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Fam196aQ3USH1 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC18.49■□□□□ 0.55
Fam196aQ3USH1 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
Fam196aQ3USH1 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Fam196aQ3USH1 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Fam196aQ3USH1 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Fam196aQ3USH1 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC18.49■□□□□ 0.55
Fam196aQ3USH1 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC18.49■□□□□ 0.55
Fam196aQ3USH1 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC18.49■□□□□ 0.55
Fam196aQ3USH1 Pdcd2l-201ENSMUST00000002710 1295 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Fam196aQ3USH1 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Fam196aQ3USH1 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Fam196aQ3USH1 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Fam196aQ3USH1 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
Fam196aQ3USH1 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Fam196aQ3USH1 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Fam196aQ3USH1 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Fam196aQ3USH1 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Fam196aQ3USH1 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Fam196aQ3USH1 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC18.48■□□□□ 0.55
Fam196aQ3USH1 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Fam196aQ3USH1 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC18.48■□□□□ 0.55
Fam196aQ3USH1 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Fam196aQ3USH1 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Fam196aQ3USH1 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Fam196aQ3USH1 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Fam196aQ3USH1 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Fam196aQ3USH1 Mir6349-201ENSMUST00000184059 97 ntBASIC18.47■□□□□ 0.55
Fam196aQ3USH1 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Fam196aQ3USH1 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
Fam196aQ3USH1 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Fam196aQ3USH1 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
Fam196aQ3USH1 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
Fam196aQ3USH1 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Fam196aQ3USH1 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Fam196aQ3USH1 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
Fam196aQ3USH1 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC18.47■□□□□ 0.55
Fam196aQ3USH1 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Fam196aQ3USH1 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Fam196aQ3USH1 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
Fam196aQ3USH1 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Fam196aQ3USH1 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 18.9 ms