Protein–RNA interactions for Protein: Q05793

Hspg2, Basement membrane-specific heparan sulfate proteoglycan core protein, mousemouse

Known RBP Predictions only

Length 3,707 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hspg2Q05793 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Hspg2Q05793 Gm10013-201ENSMUST00000106074 672 ntBASIC13.7□□□□□ -0.22
Hspg2Q05793 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
Hspg2Q05793 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Hspg2Q05793 Rpp25l-201ENSMUST00000038434 856 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Hspg2Q05793 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Hspg2Q05793 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Hspg2Q05793 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Hspg2Q05793 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Hspg2Q05793 Gm10654-201ENSMUST00000098653 1633 ntBASIC13.69□□□□□ -0.22
Hspg2Q05793 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Hspg2Q05793 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Hspg2Q05793 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Hspg2Q05793 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Hspg2Q05793 Ppil3-202ENSMUST00000114345 1175 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Hspg2Q05793 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC13.69□□□□□ -0.22
Hspg2Q05793 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Hspg2Q05793 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Hspg2Q05793 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
Hspg2Q05793 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Hspg2Q05793 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
Hspg2Q05793 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Hspg2Q05793 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Hspg2Q05793 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Hspg2Q05793 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Hspg2Q05793 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Hspg2Q05793 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Hspg2Q05793 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Hspg2Q05793 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Hspg2Q05793 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Hspg2Q05793 Gm30025-201ENSMUST00000218555 728 ntBASIC13.68□□□□□ -0.22
Hspg2Q05793 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Hspg2Q05793 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Hspg2Q05793 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Hspg2Q05793 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC13.68□□□□□ -0.22
Hspg2Q05793 Gm44771-201ENSMUST00000206975 626 ntBASIC13.68□□□□□ -0.22
Hspg2Q05793 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Hspg2Q05793 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Hspg2Q05793 Mocs1-202ENSMUST00000165390 729 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Hspg2Q05793 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Hspg2Q05793 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Hspg2Q05793 Cmtm7-202ENSMUST00000084867 874 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Hspg2Q05793 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Hspg2Q05793 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC13.67□□□□□ -0.22
Hspg2Q05793 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Hspg2Q05793 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC13.67□□□□□ -0.22
Hspg2Q05793 AC130713.1-201ENSMUST00000228853 1096 ntBASIC13.67□□□□□ -0.22
Hspg2Q05793 Notumos-201ENSMUST00000151998 2659 ntBASIC13.67□□□□□ -0.22
Hspg2Q05793 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Hspg2Q05793 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Hspg2Q05793 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Hspg2Q05793 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC13.67□□□□□ -0.22
Hspg2Q05793 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Hspg2Q05793 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC13.67□□□□□ -0.22
Hspg2Q05793 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC13.67□□□□□ -0.22
Hspg2Q05793 AC159205.3-201ENSMUST00000224614 874 ntBASIC13.67□□□□□ -0.22
Hspg2Q05793 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Hspg2Q05793 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC13.66□□□□□ -0.22
Hspg2Q05793 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC13.66□□□□□ -0.22
Hspg2Q05793 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Hspg2Q05793 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Hspg2Q05793 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Hspg2Q05793 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Hspg2Q05793 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Hspg2Q05793 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC13.66□□□□□ -0.22
Hspg2Q05793 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Hspg2Q05793 Idnk-201ENSMUST00000051490 764 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Hspg2Q05793 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Hspg2Q05793 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Hspg2Q05793 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Hspg2Q05793 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Hspg2Q05793 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Hspg2Q05793 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Hspg2Q05793 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Hspg2Q05793 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Hspg2Q05793 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Hspg2Q05793 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Hspg2Q05793 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
Hspg2Q05793 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Hspg2Q05793 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Hspg2Q05793 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Hspg2Q05793 Pgam1-ps2-201ENSMUST00000117129 765 ntBASIC13.65□□□□□ -0.22
Hspg2Q05793 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
Hspg2Q05793 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Hspg2Q05793 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
Hspg2Q05793 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Hspg2Q05793 Nat8f3-202ENSMUST00000168531 1347 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Hspg2Q05793 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Hspg2Q05793 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Hspg2Q05793 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC13.65□□□□□ -0.22
Hspg2Q05793 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC13.65□□□□□ -0.22
Hspg2Q05793 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC13.65□□□□□ -0.22
Hspg2Q05793 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC13.65□□□□□ -0.22
Hspg2Q05793 Gm5867-201ENSMUST00000063197 592 ntBASIC13.65□□□□□ -0.22
Hspg2Q05793 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
Hspg2Q05793 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.23
Hspg2Q05793 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Hspg2Q05793 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Hspg2Q05793 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Hspg2Q05793 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 17.7 ms