Protein–RNA interactions for Protein: P97386

Lig3, DNA ligase 3, mousemouse

Predictions only

Length 1,015 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lig3P97386 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Lig3P97386 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
Lig3P97386 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Lig3P97386 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC19.94■□□□□ 0.78
Lig3P97386 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC19.94■□□□□ 0.78
Lig3P97386 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC19.94■□□□□ 0.78
Lig3P97386 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Lig3P97386 Gm19439-201ENSMUST00000198195 2273 ntBASIC19.94■□□□□ 0.78
Lig3P97386 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Lig3P97386 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Lig3P97386 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Lig3P97386 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
Lig3P97386 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Lig3P97386 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Lig3P97386 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Lig3P97386 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Lig3P97386 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Lig3P97386 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Lig3P97386 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC19.94■□□□□ 0.78
Lig3P97386 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
Lig3P97386 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Lig3P97386 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC19.94■□□□□ 0.78
Lig3P97386 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Lig3P97386 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC19.93■□□□□ 0.78
Lig3P97386 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC19.93■□□□□ 0.78
Lig3P97386 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
Lig3P97386 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Lig3P97386 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Lig3P97386 Gm13534-201ENSMUST00000121169 513 ntBASIC19.93■□□□□ 0.78
Lig3P97386 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Lig3P97386 Gm26524-201ENSMUST00000192339 390 ntBASIC19.93■□□□□ 0.78
Lig3P97386 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Lig3P97386 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC19.93■□□□□ 0.78
Lig3P97386 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Lig3P97386 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Lig3P97386 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
Lig3P97386 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Lig3P97386 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Lig3P97386 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
Lig3P97386 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
Lig3P97386 Gm45606-201ENSMUST00000209836 2795 ntBASIC19.92■□□□□ 0.78
Lig3P97386 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Lig3P97386 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
Lig3P97386 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Lig3P97386 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Lig3P97386 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
Lig3P97386 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
Lig3P97386 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Lig3P97386 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Lig3P97386 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Lig3P97386 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
Lig3P97386 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Lig3P97386 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
Lig3P97386 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC19.92■□□□□ 0.78
Lig3P97386 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Lig3P97386 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Lig3P97386 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Lig3P97386 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Lig3P97386 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Lig3P97386 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Lig3P97386 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC19.91■□□□□ 0.78
Lig3P97386 Gm6576-201ENSMUST00000169678 883 ntBASIC19.91■□□□□ 0.78
Lig3P97386 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
Lig3P97386 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC19.91■□□□□ 0.78
Lig3P97386 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Lig3P97386 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Lig3P97386 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Lig3P97386 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
Lig3P97386 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC19.91■□□□□ 0.78
Lig3P97386 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Lig3P97386 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Lig3P97386 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Lig3P97386 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Lig3P97386 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
Lig3P97386 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Lig3P97386 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Lig3P97386 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Lig3P97386 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Lig3P97386 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Lig3P97386 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Lig3P97386 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Lig3P97386 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Lig3P97386 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC19.89■□□□□ 0.78
Lig3P97386 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.78
Lig3P97386 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.78
Lig3P97386 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC19.89■□□□□ 0.77
Lig3P97386 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC19.89■□□□□ 0.77
Lig3P97386 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Lig3P97386 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Lig3P97386 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC19.89■□□□□ 0.77
Lig3P97386 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Lig3P97386 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
Lig3P97386 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC19.89■□□□□ 0.77
Lig3P97386 Arhgef33-211ENSMUST00000225658 473 ntBASIC19.89■□□□□ 0.77
Lig3P97386 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
Lig3P97386 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Lig3P97386 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Lig3P97386 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC19.89■□□□□ 0.77
Lig3P97386 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Lig3P97386 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Retrieved 100 of 76,532 protein–RNA pairs in 28.7 ms