Protein–RNA interactions for Protein: P86449

Trim43c, Tripartite motif-containing protein 43C, mousemouse

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43cP86449 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC20.03■□□□□ 0.8
Trim43cP86449 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC20.03■□□□□ 0.8
Trim43cP86449 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Trim43cP86449 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Trim43cP86449 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
Trim43cP86449 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
Trim43cP86449 Gm35558-201ENSMUST00000222675 2219 ntBASIC20.03■□□□□ 0.8
Trim43cP86449 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Trim43cP86449 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
Trim43cP86449 Gm5953-201ENSMUST00000220644 2616 ntBASIC20.03■□□□□ 0.8
Trim43cP86449 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC20.02■□□□□ 0.8
Trim43cP86449 Gm7290-201ENSMUST00000104990 617 ntBASIC20.02■□□□□ 0.8
Trim43cP86449 Gm12918-201ENSMUST00000120234 636 ntBASIC20.02■□□□□ 0.8
Trim43cP86449 Gm15710-201ENSMUST00000121821 636 ntBASIC20.02■□□□□ 0.8
Trim43cP86449 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC20.02■□□□□ 0.8
Trim43cP86449 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Trim43cP86449 Gm5075-201ENSMUST00000196916 622 ntBASIC20.02■□□□□ 0.8
Trim43cP86449 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
Trim43cP86449 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC20.02■□□□□ 0.8
Trim43cP86449 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC20.02■□□□□ 0.8
Trim43cP86449 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC20.02■□□□□ 0.8
Trim43cP86449 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
Trim43cP86449 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
Trim43cP86449 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC20.02■□□□□ 0.79
Trim43cP86449 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
Trim43cP86449 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
Trim43cP86449 Gm9194-201ENSMUST00000220749 1447 ntBASIC20.02■□□□□ 0.79
Trim43cP86449 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
Trim43cP86449 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Trim43cP86449 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Trim43cP86449 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Trim43cP86449 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
Trim43cP86449 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Trim43cP86449 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Trim43cP86449 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
Trim43cP86449 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
Trim43cP86449 AC164629.5-201ENSMUST00000220387 632 ntBASIC20.01■□□□□ 0.79
Trim43cP86449 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Trim43cP86449 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Trim43cP86449 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC20.01■□□□□ 0.79
Trim43cP86449 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Trim43cP86449 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Trim43cP86449 Gm13509-201ENSMUST00000119733 1308 ntBASIC20.01■□□□□ 0.79
Trim43cP86449 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Trim43cP86449 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
Trim43cP86449 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
Trim43cP86449 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Trim43cP86449 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC20■□□□□ 0.79
Trim43cP86449 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
Trim43cP86449 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
Trim43cP86449 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Trim43cP86449 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
Trim43cP86449 Gm6211-202ENSMUST00000167849 925 ntBASIC20■□□□□ 0.79
Trim43cP86449 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Trim43cP86449 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Trim43cP86449 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC20■□□□□ 0.79
Trim43cP86449 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC20■□□□□ 0.79
Trim43cP86449 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
Trim43cP86449 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
Trim43cP86449 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC19.99■□□□□ 0.79
Trim43cP86449 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Trim43cP86449 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Trim43cP86449 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Trim43cP86449 Gm22325-201ENSMUST00000158904 308 ntBASIC19.99■□□□□ 0.79
Trim43cP86449 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
Trim43cP86449 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC19.99■□□□□ 0.79
Trim43cP86449 AC123834.2-201ENSMUST00000224038 2340 ntBASIC19.99■□□□□ 0.79
Trim43cP86449 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Trim43cP86449 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Trim43cP86449 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Trim43cP86449 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC19.98■□□□□ 0.79
Trim43cP86449 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Trim43cP86449 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC19.98■□□□□ 0.79
Trim43cP86449 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC19.98■□□□□ 0.79
Trim43cP86449 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC19.98■□□□□ 0.79
Trim43cP86449 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Trim43cP86449 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Trim43cP86449 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC19.98■□□□□ 0.79
Trim43cP86449 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC19.98■□□□□ 0.79
Trim43cP86449 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Trim43cP86449 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Trim43cP86449 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC19.97■□□□□ 0.79
Trim43cP86449 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Trim43cP86449 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Trim43cP86449 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC19.97■□□□□ 0.79
Trim43cP86449 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Trim43cP86449 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Trim43cP86449 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Trim43cP86449 Slc35b2-207ENSMUST00000226086 850 ntBASIC19.97■□□□□ 0.79
Trim43cP86449 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC19.97■□□□□ 0.79
Trim43cP86449 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Trim43cP86449 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Trim43cP86449 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC19.97■□□□□ 0.79
Trim43cP86449 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Trim43cP86449 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC19.97■□□□□ 0.79
Trim43cP86449 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Trim43cP86449 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Trim43cP86449 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Trim43cP86449 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Trim43cP86449 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Retrieved 100 of 76,532 protein–RNA pairs in 21.4 ms