Protein–RNA interactions for Protein: P86448

Trim43b, Tripartite motif-containing protein 43B, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43bP86448 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC18.88■□□□□ 0.61
Trim43bP86448 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Trim43bP86448 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
Trim43bP86448 Gm10849-201ENSMUST00000100397 618 ntBASIC18.87■□□□□ 0.61
Trim43bP86448 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
Trim43bP86448 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Trim43bP86448 Gm43702-201ENSMUST00000198772 2546 ntBASIC18.87■□□□□ 0.61
Trim43bP86448 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Trim43bP86448 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC18.87■□□□□ 0.61
Trim43bP86448 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
Trim43bP86448 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Trim43bP86448 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Trim43bP86448 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
Trim43bP86448 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Trim43bP86448 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Trim43bP86448 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Trim43bP86448 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Trim43bP86448 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
Trim43bP86448 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Trim43bP86448 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Trim43bP86448 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
Trim43bP86448 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Trim43bP86448 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Trim43bP86448 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Trim43bP86448 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Trim43bP86448 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Trim43bP86448 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
Trim43bP86448 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Trim43bP86448 Gm27405-201ENSMUST00000184201 112 ntBASIC18.85■□□□□ 0.61
Trim43bP86448 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC18.85■□□□□ 0.61
Trim43bP86448 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC18.85■□□□□ 0.61
Trim43bP86448 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Trim43bP86448 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Trim43bP86448 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Trim43bP86448 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Trim43bP86448 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Trim43bP86448 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Trim43bP86448 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Trim43bP86448 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Trim43bP86448 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Trim43bP86448 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Trim43bP86448 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC18.84■□□□□ 0.61
Trim43bP86448 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Trim43bP86448 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC18.84■□□□□ 0.61
Trim43bP86448 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC18.84■□□□□ 0.61
Trim43bP86448 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC18.84■□□□□ 0.61
Trim43bP86448 Gm7291-201ENSMUST00000199147 382 ntBASIC18.84■□□□□ 0.61
Trim43bP86448 Gm42569-201ENSMUST00000200539 472 ntBASIC18.84■□□□□ 0.61
Trim43bP86448 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Trim43bP86448 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Trim43bP86448 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Trim43bP86448 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
Trim43bP86448 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Trim43bP86448 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Trim43bP86448 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
Trim43bP86448 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Trim43bP86448 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Trim43bP86448 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
Trim43bP86448 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Trim43bP86448 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.61
Trim43bP86448 AC164629.5-201ENSMUST00000220387 632 ntBASIC18.83■□□□□ 0.6
Trim43bP86448 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC18.83■□□□□ 0.6
Trim43bP86448 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Trim43bP86448 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Trim43bP86448 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC18.82■□□□□ 0.6
Trim43bP86448 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC18.82■□□□□ 0.6
Trim43bP86448 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Trim43bP86448 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC18.82■□□□□ 0.6
Trim43bP86448 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Trim43bP86448 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
Trim43bP86448 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC18.82■□□□□ 0.6
Trim43bP86448 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC18.82■□□□□ 0.6
Trim43bP86448 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
Trim43bP86448 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Trim43bP86448 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Trim43bP86448 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Trim43bP86448 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
Trim43bP86448 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
Trim43bP86448 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Trim43bP86448 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Trim43bP86448 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Trim43bP86448 Gm10033-202ENSMUST00000211874 928 ntBASIC18.81■□□□□ 0.6
Trim43bP86448 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Trim43bP86448 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
Trim43bP86448 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
Trim43bP86448 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
Trim43bP86448 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC18.81■□□□□ 0.6
Trim43bP86448 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC18.81■□□□□ 0.6
Trim43bP86448 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Trim43bP86448 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Trim43bP86448 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Trim43bP86448 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Trim43bP86448 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Trim43bP86448 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Trim43bP86448 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Trim43bP86448 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC18.8■□□□□ 0.6
Trim43bP86448 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Trim43bP86448 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC18.8■□□□□ 0.6
Trim43bP86448 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Trim43bP86448 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 19.8 ms