Protein–RNA interactions for Protein: P84244

H3f3a, Histone H3.3, mousemouse

Known RBP Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3f3aP84244 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
H3f3aP84244 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
H3f3aP84244 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
H3f3aP84244 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
H3f3aP84244 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC16.39■□□□□ 0.21
H3f3aP84244 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
H3f3aP84244 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC16.39■□□□□ 0.21
H3f3aP84244 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
H3f3aP84244 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
H3f3aP84244 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
H3f3aP84244 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
H3f3aP84244 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
H3f3aP84244 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
H3f3aP84244 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
H3f3aP84244 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
H3f3aP84244 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC16.38■□□□□ 0.21
H3f3aP84244 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC16.38■□□□□ 0.21
H3f3aP84244 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
H3f3aP84244 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC16.38■□□□□ 0.21
H3f3aP84244 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
H3f3aP84244 Gm37563-201ENSMUST00000192580 1513 ntBASIC16.38■□□□□ 0.21
H3f3aP84244 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
H3f3aP84244 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
H3f3aP84244 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
H3f3aP84244 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
H3f3aP84244 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
H3f3aP84244 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
H3f3aP84244 Gm37805-201ENSMUST00000192612 1094 ntBASIC16.37■□□□□ 0.21
H3f3aP84244 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC16.37■□□□□ 0.21
H3f3aP84244 Gm13509-201ENSMUST00000119733 1308 ntBASIC16.37■□□□□ 0.21
H3f3aP84244 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC16.37■□□□□ 0.21
H3f3aP84244 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
H3f3aP84244 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
H3f3aP84244 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC16.36■□□□□ 0.21
H3f3aP84244 Gm45906-201ENSMUST00000208911 1430 ntBASIC16.36■□□□□ 0.21
H3f3aP84244 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
H3f3aP84244 Gm6627-201ENSMUST00000218299 2386 ntBASIC16.36■□□□□ 0.21
H3f3aP84244 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
H3f3aP84244 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
H3f3aP84244 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
H3f3aP84244 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
H3f3aP84244 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
H3f3aP84244 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
H3f3aP84244 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
H3f3aP84244 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
H3f3aP84244 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
H3f3aP84244 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
H3f3aP84244 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
H3f3aP84244 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
H3f3aP84244 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
H3f3aP84244 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
H3f3aP84244 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
H3f3aP84244 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
H3f3aP84244 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
H3f3aP84244 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
H3f3aP84244 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
H3f3aP84244 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
H3f3aP84244 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
H3f3aP84244 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
H3f3aP84244 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
H3f3aP84244 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
H3f3aP84244 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
H3f3aP84244 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
H3f3aP84244 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
H3f3aP84244 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC16.34■□□□□ 0.21
H3f3aP84244 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
H3f3aP84244 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
H3f3aP84244 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
H3f3aP84244 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC16.34■□□□□ 0.21
H3f3aP84244 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
H3f3aP84244 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC16.34■□□□□ 0.21
H3f3aP84244 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
H3f3aP84244 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
H3f3aP84244 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
H3f3aP84244 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
H3f3aP84244 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
H3f3aP84244 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
H3f3aP84244 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
H3f3aP84244 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
H3f3aP84244 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
H3f3aP84244 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
H3f3aP84244 AC107452.1-201ENSMUST00000227963 481 ntBASIC16.33■□□□□ 0.2
H3f3aP84244 Gm10602-201ENSMUST00000098239 609 ntBASIC16.33■□□□□ 0.2
H3f3aP84244 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
H3f3aP84244 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC16.33■□□□□ 0.2
H3f3aP84244 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
H3f3aP84244 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
H3f3aP84244 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
H3f3aP84244 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
H3f3aP84244 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
H3f3aP84244 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC16.32■□□□□ 0.2
H3f3aP84244 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
H3f3aP84244 Gm22325-201ENSMUST00000158904 308 ntBASIC16.32■□□□□ 0.2
H3f3aP84244 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
H3f3aP84244 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
H3f3aP84244 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
H3f3aP84244 Gm26524-201ENSMUST00000192339 390 ntBASIC16.32■□□□□ 0.2
H3f3aP84244 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
H3f3aP84244 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
H3f3aP84244 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 24.8 ms