Protein–RNA interactions for Protein: P79621

Ciita, MHC class II transactivator, mousemouse

Predictions only

Length 1,155 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CiitaP79621 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CiitaP79621 Gm9885-202ENSMUST00000186234 2209 ntBASIC19.97■□□□□ 0.79
CiitaP79621 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
CiitaP79621 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
CiitaP79621 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC19.97■□□□□ 0.79
CiitaP79621 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
CiitaP79621 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
CiitaP79621 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CiitaP79621 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
CiitaP79621 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC19.96■□□□□ 0.79
CiitaP79621 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CiitaP79621 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC19.96■□□□□ 0.79
CiitaP79621 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC19.96■□□□□ 0.79
CiitaP79621 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CiitaP79621 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CiitaP79621 Flg-201ENSMUST00000050758 1488 ntBASIC19.96■□□□□ 0.79
CiitaP79621 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC19.96■□□□□ 0.79
CiitaP79621 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC19.96■□□□□ 0.79
CiitaP79621 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.79
CiitaP79621 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CiitaP79621 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CiitaP79621 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
CiitaP79621 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC19.95■□□□□ 0.78
CiitaP79621 Gm11927-201ENSMUST00000118472 759 ntBASIC19.95■□□□□ 0.78
CiitaP79621 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CiitaP79621 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CiitaP79621 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CiitaP79621 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC19.95■□□□□ 0.78
CiitaP79621 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CiitaP79621 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CiitaP79621 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
CiitaP79621 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CiitaP79621 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CiitaP79621 Gm5784-201ENSMUST00000179344 2478 ntBASIC19.94■□□□□ 0.78
CiitaP79621 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CiitaP79621 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC19.94■□□□□ 0.78
CiitaP79621 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC19.94■□□□□ 0.78
CiitaP79621 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC19.94■□□□□ 0.78
CiitaP79621 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
CiitaP79621 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
CiitaP79621 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CiitaP79621 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC19.94■□□□□ 0.78
CiitaP79621 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
CiitaP79621 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC19.94■□□□□ 0.78
CiitaP79621 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CiitaP79621 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
CiitaP79621 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC19.94■□□□□ 0.78
CiitaP79621 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
CiitaP79621 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
CiitaP79621 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
CiitaP79621 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC19.93■□□□□ 0.78
CiitaP79621 AC163280.1-201ENSMUST00000228194 1100 ntBASIC19.93■□□□□ 0.78
CiitaP79621 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CiitaP79621 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
CiitaP79621 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
CiitaP79621 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CiitaP79621 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
CiitaP79621 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CiitaP79621 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC19.92■□□□□ 0.78
CiitaP79621 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CiitaP79621 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC19.92■□□□□ 0.78
CiitaP79621 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
CiitaP79621 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
CiitaP79621 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CiitaP79621 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
CiitaP79621 Zfp783-201ENSMUST00000095946 670 ntBASIC19.92■□□□□ 0.78
CiitaP79621 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CiitaP79621 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
CiitaP79621 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
CiitaP79621 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
CiitaP79621 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
CiitaP79621 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CiitaP79621 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CiitaP79621 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CiitaP79621 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
CiitaP79621 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CiitaP79621 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CiitaP79621 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
CiitaP79621 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
CiitaP79621 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
CiitaP79621 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
CiitaP79621 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
CiitaP79621 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CiitaP79621 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CiitaP79621 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CiitaP79621 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CiitaP79621 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
CiitaP79621 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
CiitaP79621 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC19.91■□□□□ 0.78
CiitaP79621 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
CiitaP79621 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CiitaP79621 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CiitaP79621 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CiitaP79621 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CiitaP79621 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CiitaP79621 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CiitaP79621 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC19.9■□□□□ 0.78
CiitaP79621 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CiitaP79621 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CiitaP79621 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Retrieved 100 of 76,532 protein–RNA pairs in 16.8 ms