Protein–RNA interactions for Protein: P63154

Crnkl1, Crooked neck-like protein 1, mousemouse

Known RBP Predictions only

Length 690 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Crnkl1P63154 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
Crnkl1P63154 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Crnkl1P63154 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC18.18■□□□□ 0.5
Crnkl1P63154 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Crnkl1P63154 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
Crnkl1P63154 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Crnkl1P63154 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Crnkl1P63154 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Crnkl1P63154 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Crnkl1P63154 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Crnkl1P63154 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Crnkl1P63154 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Crnkl1P63154 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC18.18■□□□□ 0.5
Crnkl1P63154 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Crnkl1P63154 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Crnkl1P63154 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Crnkl1P63154 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Crnkl1P63154 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
Crnkl1P63154 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Crnkl1P63154 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC18.18■□□□□ 0.5
Crnkl1P63154 Gm5828-201ENSMUST00000071842 1860 ntBASIC18.18■□□□□ 0.5
Crnkl1P63154 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Crnkl1P63154 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Crnkl1P63154 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
Crnkl1P63154 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Crnkl1P63154 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
Crnkl1P63154 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Crnkl1P63154 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Crnkl1P63154 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
Crnkl1P63154 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC18.17■□□□□ 0.5
Crnkl1P63154 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Crnkl1P63154 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Crnkl1P63154 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Crnkl1P63154 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
Crnkl1P63154 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Crnkl1P63154 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Crnkl1P63154 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC18.16■□□□□ 0.5
Crnkl1P63154 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Crnkl1P63154 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
Crnkl1P63154 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
Crnkl1P63154 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
Crnkl1P63154 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Crnkl1P63154 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Crnkl1P63154 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Crnkl1P63154 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC18.16■□□□□ 0.5
Crnkl1P63154 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Crnkl1P63154 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC18.16■□□□□ 0.5
Crnkl1P63154 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Crnkl1P63154 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Crnkl1P63154 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC18.16■□□□□ 0.5
Crnkl1P63154 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Crnkl1P63154 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Crnkl1P63154 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC18.15■□□□□ 0.5
Crnkl1P63154 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Crnkl1P63154 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC18.15■□□□□ 0.5
Crnkl1P63154 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Crnkl1P63154 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Crnkl1P63154 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Crnkl1P63154 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Crnkl1P63154 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC18.15■□□□□ 0.5
Crnkl1P63154 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC18.15■□□□□ 0.5
Crnkl1P63154 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Crnkl1P63154 Gm45244-201ENSMUST00000211328 2200 ntBASIC18.15■□□□□ 0.5
Crnkl1P63154 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
Crnkl1P63154 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Crnkl1P63154 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Crnkl1P63154 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC18.14■□□□□ 0.5
Crnkl1P63154 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Crnkl1P63154 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.5
Crnkl1P63154 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.5
Crnkl1P63154 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Crnkl1P63154 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Crnkl1P63154 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
Crnkl1P63154 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Crnkl1P63154 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC18.14■□□□□ 0.49
Crnkl1P63154 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC18.14■□□□□ 0.49
Crnkl1P63154 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC18.14■□□□□ 0.49
Crnkl1P63154 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
Crnkl1P63154 Gm10571-201ENSMUST00000097869 1638 ntBASIC18.14■□□□□ 0.49
Crnkl1P63154 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Crnkl1P63154 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
Crnkl1P63154 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Crnkl1P63154 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Crnkl1P63154 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Crnkl1P63154 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Crnkl1P63154 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Crnkl1P63154 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Crnkl1P63154 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Crnkl1P63154 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Crnkl1P63154 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Crnkl1P63154 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Crnkl1P63154 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Crnkl1P63154 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Crnkl1P63154 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Crnkl1P63154 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC18.13■□□□□ 0.49
Crnkl1P63154 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC18.13■□□□□ 0.49
Crnkl1P63154 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
Crnkl1P63154 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Crnkl1P63154 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC18.13■□□□□ 0.49
Crnkl1P63154 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 69.6 ms