Protein–RNA interactions for Protein: P63006

Lhx1, LIM/homeobox protein Lhx1, mousemouse

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lhx1P63006 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Lhx1P63006 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Lhx1P63006 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Lhx1P63006 Gm37805-201ENSMUST00000192612 1094 ntBASIC18.09■□□□□ 0.49
Lhx1P63006 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Lhx1P63006 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Lhx1P63006 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Lhx1P63006 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Lhx1P63006 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC18.09■□□□□ 0.49
Lhx1P63006 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Lhx1P63006 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.49
Lhx1P63006 Gm7856-201ENSMUST00000117514 1493 ntBASIC18.08■□□□□ 0.49
Lhx1P63006 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Lhx1P63006 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
Lhx1P63006 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.48
Lhx1P63006 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Lhx1P63006 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC18.08■□□□□ 0.48
Lhx1P63006 Gm8520-201ENSMUST00000186517 868 ntBASIC18.08■□□□□ 0.48
Lhx1P63006 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC18.08■□□□□ 0.48
Lhx1P63006 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Lhx1P63006 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Lhx1P63006 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Lhx1P63006 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Lhx1P63006 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC18.08■□□□□ 0.48
Lhx1P63006 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC18.08■□□□□ 0.48
Lhx1P63006 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
Lhx1P63006 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Lhx1P63006 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
Lhx1P63006 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Lhx1P63006 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Lhx1P63006 Gm15847-201ENSMUST00000121417 1065 ntBASIC18.07■□□□□ 0.48
Lhx1P63006 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Lhx1P63006 Flg-201ENSMUST00000050758 1488 ntBASIC18.07■□□□□ 0.48
Lhx1P63006 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Lhx1P63006 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC18.06■□□□□ 0.48
Lhx1P63006 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
Lhx1P63006 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC18.06■□□□□ 0.48
Lhx1P63006 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Lhx1P63006 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
Lhx1P63006 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
Lhx1P63006 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Lhx1P63006 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC18.06■□□□□ 0.48
Lhx1P63006 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC18.06■□□□□ 0.48
Lhx1P63006 Gm44878-201ENSMUST00000205812 1295 ntBASIC18.06■□□□□ 0.48
Lhx1P63006 AC107452.1-201ENSMUST00000227963 481 ntBASIC18.06■□□□□ 0.48
Lhx1P63006 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Lhx1P63006 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
Lhx1P63006 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
Lhx1P63006 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Lhx1P63006 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Lhx1P63006 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC18.06■□□□□ 0.48
Lhx1P63006 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Lhx1P63006 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Lhx1P63006 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Lhx1P63006 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Lhx1P63006 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Lhx1P63006 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC18.06■□□□□ 0.48
Lhx1P63006 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Lhx1P63006 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Lhx1P63006 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Lhx1P63006 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Lhx1P63006 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Lhx1P63006 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
Lhx1P63006 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Lhx1P63006 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Lhx1P63006 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Lhx1P63006 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC18.05■□□□□ 0.48
Lhx1P63006 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC18.05■□□□□ 0.48
Lhx1P63006 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Lhx1P63006 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Lhx1P63006 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Lhx1P63006 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Lhx1P63006 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Lhx1P63006 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Lhx1P63006 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Lhx1P63006 Gm21596-201ENSMUST00000178049 1316 ntBASIC18.04■□□□□ 0.48
Lhx1P63006 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
Lhx1P63006 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Lhx1P63006 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC18.04■□□□□ 0.48
Lhx1P63006 Gm27275-201ENSMUST00000184318 272 ntBASIC18.04■□□□□ 0.48
Lhx1P63006 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC18.04■□□□□ 0.48
Lhx1P63006 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
Lhx1P63006 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Lhx1P63006 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC18.04■□□□□ 0.48
Lhx1P63006 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
Lhx1P63006 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Lhx1P63006 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
Lhx1P63006 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
Lhx1P63006 Gm15853-202ENSMUST00000195518 2041 ntBASIC18.03■□□□□ 0.48
Lhx1P63006 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
Lhx1P63006 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Lhx1P63006 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
Lhx1P63006 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Lhx1P63006 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Lhx1P63006 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Lhx1P63006 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC18.03■□□□□ 0.48
Lhx1P63006 Wnt10b-205ENSMUST00000226846 1204 ntBASIC18.03■□□□□ 0.48
Lhx1P63006 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Lhx1P63006 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
Lhx1P63006 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC18.03■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 40.4 ms