Protein–RNA interactions for Protein: P56726

Smo, Smoothened homolog, mousemouse

Predictions only

Length 793 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SmoP56726 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC18.53■□□□□ 0.56
SmoP56726 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC18.53■□□□□ 0.56
SmoP56726 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
SmoP56726 Trmt13-210ENSMUST00000198454 880 ntBASIC18.53■□□□□ 0.56
SmoP56726 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC18.53■□□□□ 0.56
SmoP56726 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
SmoP56726 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
SmoP56726 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
SmoP56726 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC18.53■□□□□ 0.56
SmoP56726 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC18.53■□□□□ 0.56
SmoP56726 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
SmoP56726 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
SmoP56726 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
SmoP56726 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
SmoP56726 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
SmoP56726 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
SmoP56726 Gm2399-201ENSMUST00000104944 225 ntBASIC18.52■□□□□ 0.56
SmoP56726 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC18.52■□□□□ 0.56
SmoP56726 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
SmoP56726 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
SmoP56726 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
SmoP56726 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
SmoP56726 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
SmoP56726 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
SmoP56726 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC18.52■□□□□ 0.55
SmoP56726 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
SmoP56726 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
SmoP56726 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC18.52■□□□□ 0.55
SmoP56726 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SmoP56726 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
SmoP56726 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SmoP56726 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SmoP56726 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
SmoP56726 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
SmoP56726 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
SmoP56726 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SmoP56726 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
SmoP56726 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC18.5■□□□□ 0.55
SmoP56726 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
SmoP56726 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
SmoP56726 Gm44878-201ENSMUST00000205812 1295 ntBASIC18.5■□□□□ 0.55
SmoP56726 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
SmoP56726 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
SmoP56726 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
SmoP56726 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
SmoP56726 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
SmoP56726 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
SmoP56726 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC18.49■□□□□ 0.55
SmoP56726 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
SmoP56726 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
SmoP56726 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
SmoP56726 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
SmoP56726 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
SmoP56726 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC18.49■□□□□ 0.55
SmoP56726 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
SmoP56726 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
SmoP56726 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC18.49■□□□□ 0.55
SmoP56726 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
SmoP56726 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
SmoP56726 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
SmoP56726 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
SmoP56726 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC18.49■□□□□ 0.55
SmoP56726 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
SmoP56726 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC18.48■□□□□ 0.55
SmoP56726 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
SmoP56726 Gm11249-201ENSMUST00000117071 859 ntBASIC18.48■□□□□ 0.55
SmoP56726 Gm15847-201ENSMUST00000121417 1065 ntBASIC18.48■□□□□ 0.55
SmoP56726 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
SmoP56726 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC18.48■□□□□ 0.55
SmoP56726 Wnt10b-205ENSMUST00000226846 1204 ntBASIC18.48■□□□□ 0.55
SmoP56726 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
SmoP56726 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
SmoP56726 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
SmoP56726 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
SmoP56726 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
SmoP56726 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC18.48■□□□□ 0.55
SmoP56726 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
SmoP56726 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
SmoP56726 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
SmoP56726 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
SmoP56726 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC18.47■□□□□ 0.55
SmoP56726 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
SmoP56726 Gm43231-201ENSMUST00000202960 2258 ntBASIC18.47■□□□□ 0.55
SmoP56726 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
SmoP56726 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
SmoP56726 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
SmoP56726 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
SmoP56726 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC18.47■□□□□ 0.55
SmoP56726 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC18.47■□□□□ 0.55
SmoP56726 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
SmoP56726 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
SmoP56726 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
SmoP56726 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SmoP56726 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SmoP56726 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SmoP56726 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SmoP56726 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SmoP56726 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SmoP56726 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SmoP56726 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 21.1 ms