Protein–RNA interactions for Protein: P54869

Hmgcs2, Hydroxymethylglutaryl-CoA synthase, mitochondrial, mousemouse

Predictions only

Length 508 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgcs2P54869 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC20.58■□□□□ 0.89
Hmgcs2P54869 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
Hmgcs2P54869 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.88
Hmgcs2P54869 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Hmgcs2P54869 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Hmgcs2P54869 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
Hmgcs2P54869 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC20.57■□□□□ 0.88
Hmgcs2P54869 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Hmgcs2P54869 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Hmgcs2P54869 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC20.57■□□□□ 0.88
Hmgcs2P54869 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Hmgcs2P54869 Gm18025-201ENSMUST00000221733 862 ntBASIC20.57■□□□□ 0.88
Hmgcs2P54869 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC20.57■□□□□ 0.88
Hmgcs2P54869 AC124603.1-201ENSMUST00000223843 308 ntBASIC20.57■□□□□ 0.88
Hmgcs2P54869 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
Hmgcs2P54869 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
Hmgcs2P54869 Gm45560-201ENSMUST00000211492 1472 ntBASIC20.56■□□□□ 0.88
Hmgcs2P54869 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Hmgcs2P54869 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Hmgcs2P54869 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Hmgcs2P54869 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Hmgcs2P54869 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Hmgcs2P54869 Gm15375-201ENSMUST00000119510 849 ntBASIC20.56■□□□□ 0.88
Hmgcs2P54869 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Hmgcs2P54869 Gm42545-201ENSMUST00000202755 922 ntBASIC20.56■□□□□ 0.88
Hmgcs2P54869 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Hmgcs2P54869 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Hmgcs2P54869 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Hmgcs2P54869 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Hmgcs2P54869 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Hmgcs2P54869 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Hmgcs2P54869 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC20.55■□□□□ 0.88
Hmgcs2P54869 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Hmgcs2P54869 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC20.55■□□□□ 0.88
Hmgcs2P54869 Gm6433-201ENSMUST00000118634 875 ntBASIC20.55■□□□□ 0.88
Hmgcs2P54869 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Hmgcs2P54869 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Hmgcs2P54869 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC20.55■□□□□ 0.88
Hmgcs2P54869 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC20.55■□□□□ 0.88
Hmgcs2P54869 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Hmgcs2P54869 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC20.55■□□□□ 0.88
Hmgcs2P54869 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Hmgcs2P54869 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Hmgcs2P54869 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC20.54■□□□□ 0.88
Hmgcs2P54869 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
Hmgcs2P54869 Gm38285-201ENSMUST00000192928 922 ntBASIC20.54■□□□□ 0.88
Hmgcs2P54869 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC20.54■□□□□ 0.88
Hmgcs2P54869 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Hmgcs2P54869 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Hmgcs2P54869 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Hmgcs2P54869 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Hmgcs2P54869 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Hmgcs2P54869 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC20.54■□□□□ 0.88
Hmgcs2P54869 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Hmgcs2P54869 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Hmgcs2P54869 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Hmgcs2P54869 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Hmgcs2P54869 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Hmgcs2P54869 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Hmgcs2P54869 Gm16042-201ENSMUST00000204813 1247 ntBASIC20.53■□□□□ 0.88
Hmgcs2P54869 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC20.53■□□□□ 0.88
Hmgcs2P54869 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
Hmgcs2P54869 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Hmgcs2P54869 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
Hmgcs2P54869 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
Hmgcs2P54869 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC20.52■□□□□ 0.88
Hmgcs2P54869 AC124581.1-201ENSMUST00000225416 1399 ntBASIC20.52■□□□□ 0.88
Hmgcs2P54869 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Hmgcs2P54869 Gm10231-201ENSMUST00000181584 441 ntBASIC20.52■□□□□ 0.88
Hmgcs2P54869 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Hmgcs2P54869 Gm10175-202ENSMUST00000208752 441 ntBASIC20.52■□□□□ 0.88
Hmgcs2P54869 Arhgef4-208ENSMUST00000211073 171 ntBASIC20.52■□□□□ 0.88
Hmgcs2P54869 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Hmgcs2P54869 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
Hmgcs2P54869 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Hmgcs2P54869 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
Hmgcs2P54869 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Hmgcs2P54869 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
Hmgcs2P54869 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Hmgcs2P54869 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Hmgcs2P54869 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC20.51■□□□□ 0.87
Hmgcs2P54869 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Hmgcs2P54869 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Hmgcs2P54869 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
Hmgcs2P54869 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
Hmgcs2P54869 Gm21814-202ENSMUST00000203277 873 ntBASIC20.51■□□□□ 0.87
Hmgcs2P54869 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Hmgcs2P54869 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Hmgcs2P54869 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Hmgcs2P54869 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Hmgcs2P54869 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Hmgcs2P54869 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Hmgcs2P54869 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
Hmgcs2P54869 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Hmgcs2P54869 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC20.5■□□□□ 0.87
Hmgcs2P54869 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Hmgcs2P54869 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Hmgcs2P54869 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
Hmgcs2P54869 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Hmgcs2P54869 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 42.2 ms