Protein–RNA interactions for Protein: P53783

Sox1, Transcription factor SOX-1, mousemouse

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox1P53783 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Sox1P53783 Tmem241-205ENSMUST00000209859 1426 ntAPPRIS P4 TSL 1 (best) BASIC18.84■□□□□ 0.61
Sox1P53783 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Sox1P53783 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Sox1P53783 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC18.84■□□□□ 0.61
Sox1P53783 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC18.84■□□□□ 0.61
Sox1P53783 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC18.84■□□□□ 0.61
Sox1P53783 Tex30-206ENSMUST00000133677 935 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Sox1P53783 Rasl2-9-201ENSMUST00000147835 1013 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
Sox1P53783 0610025J13Rik-203ENSMUST00000180374 713 ntTSL 5 BASIC18.84■□□□□ 0.61
Sox1P53783 Gm2274-201ENSMUST00000184539 609 ntBASIC18.84■□□□□ 0.61
Sox1P53783 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC18.84■□□□□ 0.61
Sox1P53783 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC18.84■□□□□ 0.61
Sox1P53783 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Sox1P53783 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Sox1P53783 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC18.84■□□□□ 0.61
Sox1P53783 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Sox1P53783 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Sox1P53783 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.61
Sox1P53783 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Sox1P53783 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Sox1P53783 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Sox1P53783 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Sox1P53783 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
Sox1P53783 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Sox1P53783 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC18.83■□□□□ 0.6
Sox1P53783 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC18.83■□□□□ 0.6
Sox1P53783 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Sox1P53783 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Sox1P53783 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
Sox1P53783 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Sox1P53783 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC18.83■□□□□ 0.6
Sox1P53783 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
Sox1P53783 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
Sox1P53783 Slbp-205ENSMUST00000139518 1191 ntAPPRIS ALT2 TSL 2 BASIC18.82■□□□□ 0.6
Sox1P53783 Cenpp-201ENSMUST00000021818 1144 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Sox1P53783 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Sox1P53783 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Sox1P53783 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Sox1P53783 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
Sox1P53783 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Sox1P53783 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Sox1P53783 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
Sox1P53783 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC18.81■□□□□ 0.6
Sox1P53783 Gm18958-201ENSMUST00000174258 762 ntBASIC18.81■□□□□ 0.6
Sox1P53783 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Sox1P53783 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Sox1P53783 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Sox1P53783 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Sox1P53783 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Sox1P53783 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Sox1P53783 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Sox1P53783 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Sox1P53783 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
Sox1P53783 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
Sox1P53783 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Sox1P53783 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
Sox1P53783 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC18.8■□□□□ 0.6
Sox1P53783 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Sox1P53783 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Sox1P53783 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
Sox1P53783 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Sox1P53783 Ahnak-201ENSMUST00000092955 1046 ntAPPRIS ALT2 TSL 2 BASIC18.8■□□□□ 0.6
Sox1P53783 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Sox1P53783 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Sox1P53783 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Sox1P53783 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Sox1P53783 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Sox1P53783 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
Sox1P53783 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC18.79■□□□□ 0.6
Sox1P53783 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
Sox1P53783 Gm28577-201ENSMUST00000176106 741 ntTSL 5 BASIC18.79■□□□□ 0.6
Sox1P53783 Gm29518-201ENSMUST00000190858 372 ntBASIC18.79■□□□□ 0.6
Sox1P53783 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
Sox1P53783 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Sox1P53783 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Sox1P53783 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Sox1P53783 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
Sox1P53783 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Sox1P53783 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Sox1P53783 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Sox1P53783 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Sox1P53783 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC18.78■□□□□ 0.6
Sox1P53783 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Sox1P53783 Pemt-203ENSMUST00000102693 961 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Sox1P53783 Gm12085-201ENSMUST00000119263 940 ntBASIC18.78■□□□□ 0.6
Sox1P53783 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Sox1P53783 Slc19a2-204ENSMUST00000169394 894 ntTSL 5 BASIC18.78■□□□□ 0.6
Sox1P53783 Gm26756-201ENSMUST00000181689 1294 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Sox1P53783 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC18.78■□□□□ 0.6
Sox1P53783 Ogfod2-207ENSMUST00000196627 532 ntTSL 3 BASIC18.78■□□□□ 0.6
Sox1P53783 Mrps18a-201ENSMUST00000024763 884 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Sox1P53783 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Sox1P53783 Pdlim4-202ENSMUST00000093109 962 ntTSL 5 BASIC18.78■□□□□ 0.6
Sox1P53783 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC18.78■□□□□ 0.6
Sox1P53783 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC18.77■□□□□ 0.6
Sox1P53783 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Sox1P53783 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Sox1P53783 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Sox1P53783 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 26.8 ms