Protein–RNA interactions for Protein: P49698

Hnf4a, Hepatocyte nuclear factor 4-alpha, mousemouse

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hnf4aP49698 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Hnf4aP49698 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
Hnf4aP49698 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Hnf4aP49698 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Hnf4aP49698 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Hnf4aP49698 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
Hnf4aP49698 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Hnf4aP49698 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Hnf4aP49698 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
Hnf4aP49698 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC17.81■□□□□ 0.44
Hnf4aP49698 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Hnf4aP49698 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
Hnf4aP49698 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Hnf4aP49698 Gm10167-201ENSMUST00000150411 1479 ntBASIC17.81■□□□□ 0.44
Hnf4aP49698 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Hnf4aP49698 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Hnf4aP49698 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
Hnf4aP49698 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Hnf4aP49698 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
Hnf4aP49698 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Hnf4aP49698 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
Hnf4aP49698 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Hnf4aP49698 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Hnf4aP49698 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC17.8■□□□□ 0.44
Hnf4aP49698 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC17.8■□□□□ 0.44
Hnf4aP49698 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC17.8■□□□□ 0.44
Hnf4aP49698 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
Hnf4aP49698 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Hnf4aP49698 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Hnf4aP49698 Gm45906-201ENSMUST00000208911 1430 ntBASIC17.8■□□□□ 0.44
Hnf4aP49698 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Hnf4aP49698 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Hnf4aP49698 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Hnf4aP49698 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Hnf4aP49698 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Hnf4aP49698 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Hnf4aP49698 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Hnf4aP49698 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Hnf4aP49698 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC17.79■□□□□ 0.44
Hnf4aP49698 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC17.79■□□□□ 0.44
Hnf4aP49698 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Hnf4aP49698 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
Hnf4aP49698 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Hnf4aP49698 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
Hnf4aP49698 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Hnf4aP49698 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Hnf4aP49698 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Hnf4aP49698 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Hnf4aP49698 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Hnf4aP49698 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Hnf4aP49698 Gm5874-201ENSMUST00000096101 508 ntBASIC17.78■□□□□ 0.44
Hnf4aP49698 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Hnf4aP49698 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Hnf4aP49698 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Hnf4aP49698 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Hnf4aP49698 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
Hnf4aP49698 Gm10655-201ENSMUST00000098658 1397 ntBASIC17.78■□□□□ 0.44
Hnf4aP49698 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Hnf4aP49698 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Hnf4aP49698 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Hnf4aP49698 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC17.77■□□□□ 0.44
Hnf4aP49698 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
Hnf4aP49698 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC17.77■□□□□ 0.44
Hnf4aP49698 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
Hnf4aP49698 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Hnf4aP49698 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC17.77■□□□□ 0.44
Hnf4aP49698 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.43
Hnf4aP49698 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Hnf4aP49698 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Hnf4aP49698 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Hnf4aP49698 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Hnf4aP49698 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC17.76■□□□□ 0.43
Hnf4aP49698 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Hnf4aP49698 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Hnf4aP49698 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Hnf4aP49698 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Hnf4aP49698 Gm10033-202ENSMUST00000211874 928 ntBASIC17.76■□□□□ 0.43
Hnf4aP49698 Gm18671-201ENSMUST00000214826 683 ntBASIC17.76■□□□□ 0.43
Hnf4aP49698 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Hnf4aP49698 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Hnf4aP49698 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Hnf4aP49698 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
Hnf4aP49698 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Hnf4aP49698 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Hnf4aP49698 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Hnf4aP49698 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
Hnf4aP49698 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Hnf4aP49698 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC17.75■□□□□ 0.43
Hnf4aP49698 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Hnf4aP49698 Gm42642-201ENSMUST00000200683 355 ntBASIC17.75■□□□□ 0.43
Hnf4aP49698 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Hnf4aP49698 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Hnf4aP49698 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Hnf4aP49698 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Hnf4aP49698 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Hnf4aP49698 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Hnf4aP49698 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Hnf4aP49698 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
Hnf4aP49698 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Hnf4aP49698 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 17.1 ms