Protein–RNA interactions for Protein: P48985

Atoh1, Protein atonal homolog 1, mousemouse

Predictions only

Length 351 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atoh1P48985 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
Atoh1P48985 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
Atoh1P48985 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
Atoh1P48985 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
Atoh1P48985 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Atoh1P48985 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC20.92■□□□□ 0.94
Atoh1P48985 Mir6349-201ENSMUST00000184059 97 ntBASIC20.92■□□□□ 0.94
Atoh1P48985 Gm10517-202ENSMUST00000192970 758 ntBASIC20.92■□□□□ 0.94
Atoh1P48985 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Atoh1P48985 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Atoh1P48985 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Atoh1P48985 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Atoh1P48985 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
Atoh1P48985 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Atoh1P48985 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Atoh1P48985 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Atoh1P48985 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC20.91■□□□□ 0.94
Atoh1P48985 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC20.91■□□□□ 0.94
Atoh1P48985 Dscc1-201ENSMUST00000023059 1324 ntAPPRIS P2 TSL 1 (best) BASIC20.91■□□□□ 0.94
Atoh1P48985 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Atoh1P48985 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Atoh1P48985 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
Atoh1P48985 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Atoh1P48985 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Atoh1P48985 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Atoh1P48985 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Atoh1P48985 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Atoh1P48985 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Atoh1P48985 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC20.9■□□□□ 0.94
Atoh1P48985 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
Atoh1P48985 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Atoh1P48985 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC20.9■□□□□ 0.94
Atoh1P48985 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC20.9■□□□□ 0.94
Atoh1P48985 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC20.9■□□□□ 0.94
Atoh1P48985 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
Atoh1P48985 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC20.9■□□□□ 0.94
Atoh1P48985 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC20.9■□□□□ 0.94
Atoh1P48985 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC20.9■□□□□ 0.94
Atoh1P48985 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Atoh1P48985 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.94
Atoh1P48985 Gm10013-201ENSMUST00000106074 672 ntBASIC20.89■□□□□ 0.93
Atoh1P48985 Snx15-207ENSMUST00000154601 767 ntTSL 5 BASIC20.89■□□□□ 0.93
Atoh1P48985 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC20.89■□□□□ 0.93
Atoh1P48985 AC166341.7-201ENSMUST00000221698 126 ntBASIC20.89■□□□□ 0.93
Atoh1P48985 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC20.89■□□□□ 0.93
Atoh1P48985 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Atoh1P48985 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Atoh1P48985 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Atoh1P48985 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Atoh1P48985 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
Atoh1P48985 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
Atoh1P48985 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Atoh1P48985 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Atoh1P48985 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Atoh1P48985 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
Atoh1P48985 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC20.87■□□□□ 0.93
Atoh1P48985 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Atoh1P48985 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Atoh1P48985 AA414768-201ENSMUST00000121924 1257 ntBASIC20.87■□□□□ 0.93
Atoh1P48985 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC20.87■□□□□ 0.93
Atoh1P48985 Gm6345-202ENSMUST00000180900 204 ntBASIC20.87■□□□□ 0.93
Atoh1P48985 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Atoh1P48985 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
Atoh1P48985 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Atoh1P48985 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Atoh1P48985 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Atoh1P48985 AC126028.2-201ENSMUST00000228100 1833 ntBASIC20.86■□□□□ 0.93
Atoh1P48985 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Atoh1P48985 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Atoh1P48985 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Atoh1P48985 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
Atoh1P48985 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC20.86■□□□□ 0.93
Atoh1P48985 Gm18032-201ENSMUST00000222541 538 ntBASIC20.86■□□□□ 0.93
Atoh1P48985 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
Atoh1P48985 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
Atoh1P48985 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Atoh1P48985 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Atoh1P48985 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Atoh1P48985 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Atoh1P48985 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Atoh1P48985 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC20.85■□□□□ 0.93
Atoh1P48985 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
Atoh1P48985 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
Atoh1P48985 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Atoh1P48985 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Atoh1P48985 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Atoh1P48985 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Atoh1P48985 Mgst3-201ENSMUST00000028005 1097 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Atoh1P48985 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Atoh1P48985 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Atoh1P48985 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Atoh1P48985 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
Atoh1P48985 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Atoh1P48985 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Atoh1P48985 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
Atoh1P48985 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC20.85■□□□□ 0.93
Atoh1P48985 Gm33142-201ENSMUST00000193913 867 ntBASIC20.84■□□□□ 0.93
Atoh1P48985 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Atoh1P48985 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Atoh1P48985 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Retrieved 100 of 76,532 protein–RNA pairs in 190.2 ms