Protein–RNA interactions for Protein: P43688

Nkx2-6, Homeobox protein Nkx-2.6, mousemouse

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-6P43688 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Nkx2-6P43688 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
Nkx2-6P43688 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Nkx2-6P43688 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Nkx2-6P43688 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Nkx2-6P43688 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC17.37■□□□□ 0.37
Nkx2-6P43688 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Nkx2-6P43688 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Nkx2-6P43688 Gm10167-201ENSMUST00000150411 1479 ntBASIC17.37■□□□□ 0.37
Nkx2-6P43688 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Nkx2-6P43688 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Nkx2-6P43688 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Nkx2-6P43688 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
Nkx2-6P43688 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
Nkx2-6P43688 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC17.36■□□□□ 0.37
Nkx2-6P43688 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Nkx2-6P43688 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
Nkx2-6P43688 Gm2399-201ENSMUST00000104944 225 ntBASIC17.36■□□□□ 0.37
Nkx2-6P43688 Gm15847-201ENSMUST00000121417 1065 ntBASIC17.36■□□□□ 0.37
Nkx2-6P43688 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC17.36■□□□□ 0.37
Nkx2-6P43688 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC17.36■□□□□ 0.37
Nkx2-6P43688 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC17.36■□□□□ 0.37
Nkx2-6P43688 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Nkx2-6P43688 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Nkx2-6P43688 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Nkx2-6P43688 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Nkx2-6P43688 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Nkx2-6P43688 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
Nkx2-6P43688 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
Nkx2-6P43688 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC17.35■□□□□ 0.37
Nkx2-6P43688 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Nkx2-6P43688 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Nkx2-6P43688 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Nkx2-6P43688 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Nkx2-6P43688 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Nkx2-6P43688 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Nkx2-6P43688 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Nkx2-6P43688 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
Nkx2-6P43688 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
Nkx2-6P43688 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Nkx2-6P43688 Gm13158-201ENSMUST00000122007 736 ntBASIC17.35■□□□□ 0.37
Nkx2-6P43688 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Nkx2-6P43688 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC17.35■□□□□ 0.37
Nkx2-6P43688 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Nkx2-6P43688 Nrn1-203ENSMUST00000223611 1443 ntBASIC17.35■□□□□ 0.37
Nkx2-6P43688 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC17.35■□□□□ 0.37
Nkx2-6P43688 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Nkx2-6P43688 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Nkx2-6P43688 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Nkx2-6P43688 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Nkx2-6P43688 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
Nkx2-6P43688 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
Nkx2-6P43688 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
Nkx2-6P43688 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Nkx2-6P43688 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Nkx2-6P43688 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC17.34■□□□□ 0.37
Nkx2-6P43688 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Nkx2-6P43688 Gm15378-201ENSMUST00000121894 207 ntBASIC17.34■□□□□ 0.37
Nkx2-6P43688 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Nkx2-6P43688 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
Nkx2-6P43688 Arhgef33-211ENSMUST00000225658 473 ntBASIC17.34■□□□□ 0.37
Nkx2-6P43688 Wnt10b-205ENSMUST00000226846 1204 ntBASIC17.34■□□□□ 0.37
Nkx2-6P43688 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Nkx2-6P43688 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
Nkx2-6P43688 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC17.34■□□□□ 0.37
Nkx2-6P43688 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Nkx2-6P43688 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Nkx2-6P43688 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
Nkx2-6P43688 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
Nkx2-6P43688 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Nkx2-6P43688 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Nkx2-6P43688 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Nkx2-6P43688 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC17.33■□□□□ 0.37
Nkx2-6P43688 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Nkx2-6P43688 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.37
Nkx2-6P43688 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.37
Nkx2-6P43688 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Nkx2-6P43688 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC17.33■□□□□ 0.36
Nkx2-6P43688 H2-K2-201ENSMUST00000174250 1049 ntBASIC17.33■□□□□ 0.36
Nkx2-6P43688 Gm10698-201ENSMUST00000182663 604 ntBASIC17.33■□□□□ 0.36
Nkx2-6P43688 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Nkx2-6P43688 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Nkx2-6P43688 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Nkx2-6P43688 Gm37352-201ENSMUST00000193908 2181 ntBASIC17.33■□□□□ 0.36
Nkx2-6P43688 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Nkx2-6P43688 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Nkx2-6P43688 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Nkx2-6P43688 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Nkx2-6P43688 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Nkx2-6P43688 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Nkx2-6P43688 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Nkx2-6P43688 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Nkx2-6P43688 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Nkx2-6P43688 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Nkx2-6P43688 AC124603.1-201ENSMUST00000223843 308 ntBASIC17.32■□□□□ 0.36
Nkx2-6P43688 AC163280.1-201ENSMUST00000228194 1100 ntBASIC17.32■□□□□ 0.36
Nkx2-6P43688 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Nkx2-6P43688 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Nkx2-6P43688 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Nkx2-6P43688 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 18.9 ms