Protein–RNA interactions for Protein: P42859

Htt, Huntingtin, mousemouse

Predictions only

Length 3,119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HttP42859 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
HttP42859 AC140264.2-201ENSMUST00000219668 289 ntTSL 2 BASIC19.89■□□□□ 0.77
HttP42859 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
HttP42859 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC19.89■□□□□ 0.77
HttP42859 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
HttP42859 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
HttP42859 AC152827.1-201ENSMUST00000221143 2189 ntBASIC19.88■□□□□ 0.77
HttP42859 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
HttP42859 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
HttP42859 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
HttP42859 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
HttP42859 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
HttP42859 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
HttP42859 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC19.88■□□□□ 0.77
HttP42859 Zfp783-201ENSMUST00000095946 670 ntBASIC19.88■□□□□ 0.77
HttP42859 Tmem241-205ENSMUST00000209859 1426 ntAPPRIS P4 TSL 1 (best) BASIC19.88■□□□□ 0.77
HttP42859 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
HttP42859 Gm10654-201ENSMUST00000098653 1633 ntBASIC19.88■□□□□ 0.77
HttP42859 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
HttP42859 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
HttP42859 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
HttP42859 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
HttP42859 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
HttP42859 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
HttP42859 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
HttP42859 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
HttP42859 D830030K20Rik-204ENSMUST00000225885 1142 ntBASIC19.87■□□□□ 0.77
HttP42859 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
HttP42859 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
HttP42859 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC19.86■□□□□ 0.77
HttP42859 Lce1a2-201ENSMUST00000029530 715 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
HttP42859 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC19.86■□□□□ 0.77
HttP42859 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
HttP42859 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
HttP42859 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
HttP42859 Gm4217-201ENSMUST00000182243 1002 ntBASIC19.86■□□□□ 0.77
HttP42859 Ogfod2-207ENSMUST00000196627 532 ntTSL 3 BASIC19.86■□□□□ 0.77
HttP42859 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
HttP42859 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
HttP42859 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC19.85■□□□□ 0.77
HttP42859 1500009L16Rik-201ENSMUST00000150459 1194 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
HttP42859 A830052D11Rik-201ENSMUST00000181729 1130 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
HttP42859 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
HttP42859 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
HttP42859 Gm8258-201ENSMUST00000055593 1449 ntBASIC19.85■□□□□ 0.77
HttP42859 Anp32e-201ENSMUST00000015893 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
HttP42859 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
HttP42859 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC19.85■□□□□ 0.77
HttP42859 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC19.85■□□□□ 0.77
HttP42859 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
HttP42859 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
HttP42859 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC19.84■□□□□ 0.77
HttP42859 Gm18115-201ENSMUST00000221209 621 ntBASIC19.84■□□□□ 0.77
HttP42859 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC19.84■□□□□ 0.77
HttP42859 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
HttP42859 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
HttP42859 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
HttP42859 Bpifa3-201ENSMUST00000028984 1107 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
HttP42859 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
HttP42859 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
HttP42859 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.77
HttP42859 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC19.83■□□□□ 0.77
HttP42859 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
HttP42859 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC19.83■□□□□ 0.77
HttP42859 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.77
HttP42859 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
HttP42859 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.77
HttP42859 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
HttP42859 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
HttP42859 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
HttP42859 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.76
HttP42859 2010010A06Rik-202ENSMUST00000186356 694 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
HttP42859 Gm34391-201ENSMUST00000203706 907 ntBASIC19.83■□□□□ 0.76
HttP42859 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC19.83■□□□□ 0.76
HttP42859 Gm29518-201ENSMUST00000190858 372 ntBASIC19.82■□□□□ 0.76
HttP42859 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
HttP42859 AC166341.7-201ENSMUST00000221698 126 ntBASIC19.82■□□□□ 0.76
HttP42859 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
HttP42859 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
HttP42859 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
HttP42859 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
HttP42859 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC19.82■□□□□ 0.76
HttP42859 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
HttP42859 Gm25016-201ENSMUST00000158399 131 ntBASIC19.82■□□□□ 0.76
HttP42859 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC19.82■□□□□ 0.76
HttP42859 AC164629.2-201ENSMUST00000217916 270 ntBASIC19.82■□□□□ 0.76
HttP42859 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
HttP42859 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
HttP42859 Gm43353-201ENSMUST00000199224 1295 ntBASIC19.82■□□□□ 0.76
HttP42859 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC19.82■□□□□ 0.76
HttP42859 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
HttP42859 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
HttP42859 Gm5587-201ENSMUST00000206270 674 ntBASIC19.81■□□□□ 0.76
HttP42859 AC160393.1-201ENSMUST00000218378 1279 ntBASIC19.81■□□□□ 0.76
HttP42859 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
HttP42859 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
HttP42859 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
HttP42859 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
HttP42859 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC19.81■□□□□ 0.76
HttP42859 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
Retrieved 100 of 76,532 protein–RNA pairs in 26.8 ms