Protein–RNA interactions for Protein: P41274

Tnfsf9, Tumor necrosis factor ligand superfamily member 9, mousemouse

Predictions only

Length 309 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfsf9P41274 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC17.6■□□□□ 0.41
Tnfsf9P41274 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Tnfsf9P41274 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC17.6■□□□□ 0.41
Tnfsf9P41274 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Tnfsf9P41274 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC17.6■□□□□ 0.41
Tnfsf9P41274 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Tnfsf9P41274 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Tnfsf9P41274 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Tnfsf9P41274 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
Tnfsf9P41274 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
Tnfsf9P41274 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Tnfsf9P41274 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
Tnfsf9P41274 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Tnfsf9P41274 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Tnfsf9P41274 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
Tnfsf9P41274 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Tnfsf9P41274 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Tnfsf9P41274 Gm18688-201ENSMUST00000204695 1859 ntBASIC17.58■□□□□ 0.41
Tnfsf9P41274 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Tnfsf9P41274 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Tnfsf9P41274 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Tnfsf9P41274 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Tnfsf9P41274 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC17.58■□□□□ 0.4
Tnfsf9P41274 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC17.58■□□□□ 0.4
Tnfsf9P41274 AC140264.2-202ENSMUST00000218746 817 ntBASIC17.58■□□□□ 0.4
Tnfsf9P41274 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Tnfsf9P41274 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Tnfsf9P41274 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Tnfsf9P41274 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Tnfsf9P41274 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC17.57■□□□□ 0.4
Tnfsf9P41274 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
Tnfsf9P41274 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
Tnfsf9P41274 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Tnfsf9P41274 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Tnfsf9P41274 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Tnfsf9P41274 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC17.57■□□□□ 0.4
Tnfsf9P41274 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Tnfsf9P41274 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Tnfsf9P41274 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
Tnfsf9P41274 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
Tnfsf9P41274 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Tnfsf9P41274 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Tnfsf9P41274 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC17.57■□□□□ 0.4
Tnfsf9P41274 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Tnfsf9P41274 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Tnfsf9P41274 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
Tnfsf9P41274 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Tnfsf9P41274 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Tnfsf9P41274 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Tnfsf9P41274 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Tnfsf9P41274 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
Tnfsf9P41274 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Tnfsf9P41274 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Tnfsf9P41274 Dio3-201ENSMUST00000097228 1449 ntBASIC17.56■□□□□ 0.4
Tnfsf9P41274 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
Tnfsf9P41274 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC17.56■□□□□ 0.4
Tnfsf9P41274 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC17.56■□□□□ 0.4
Tnfsf9P41274 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Tnfsf9P41274 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Tnfsf9P41274 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
Tnfsf9P41274 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC17.56■□□□□ 0.4
Tnfsf9P41274 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Tnfsf9P41274 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC17.56■□□□□ 0.4
Tnfsf9P41274 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Tnfsf9P41274 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Tnfsf9P41274 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Tnfsf9P41274 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Tnfsf9P41274 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Tnfsf9P41274 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
Tnfsf9P41274 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Tnfsf9P41274 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC17.56■□□□□ 0.4
Tnfsf9P41274 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Tnfsf9P41274 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Tnfsf9P41274 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Tnfsf9P41274 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Tnfsf9P41274 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Tnfsf9P41274 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Tnfsf9P41274 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Tnfsf9P41274 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Tnfsf9P41274 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Tnfsf9P41274 Gm21596-201ENSMUST00000178049 1316 ntBASIC17.55■□□□□ 0.4
Tnfsf9P41274 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Tnfsf9P41274 Gm2399-201ENSMUST00000104944 225 ntBASIC17.55■□□□□ 0.4
Tnfsf9P41274 Gm15847-201ENSMUST00000121417 1065 ntBASIC17.55■□□□□ 0.4
Tnfsf9P41274 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC17.55■□□□□ 0.4
Tnfsf9P41274 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Tnfsf9P41274 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Tnfsf9P41274 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Tnfsf9P41274 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Tnfsf9P41274 Gm10812-201ENSMUST00000099864 546 ntBASIC17.55■□□□□ 0.4
Tnfsf9P41274 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Tnfsf9P41274 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Tnfsf9P41274 Gm8309-201ENSMUST00000206627 1448 ntBASIC17.55■□□□□ 0.4
Tnfsf9P41274 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC17.55■□□□□ 0.4
Tnfsf9P41274 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Tnfsf9P41274 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Tnfsf9P41274 Hsf1-204ENSMUST00000226872 2104 ntBASIC17.54■□□□□ 0.4
Tnfsf9P41274 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Tnfsf9P41274 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Tnfsf9P41274 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 40.1 ms