Protein–RNA interactions for Protein: P40645

Sox6, Transcription factor SOX-6, mousemouse

Predictions only

Length 827 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox6P40645 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Sox6P40645 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Sox6P40645 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Sox6P40645 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC17.25■□□□□ 0.35
Sox6P40645 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC17.25■□□□□ 0.35
Sox6P40645 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Sox6P40645 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
Sox6P40645 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
Sox6P40645 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC17.25■□□□□ 0.35
Sox6P40645 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Sox6P40645 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
Sox6P40645 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Sox6P40645 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Sox6P40645 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Sox6P40645 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Sox6P40645 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
Sox6P40645 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Sox6P40645 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Sox6P40645 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC17.24■□□□□ 0.35
Sox6P40645 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC17.24■□□□□ 0.35
Sox6P40645 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC17.24■□□□□ 0.35
Sox6P40645 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC17.24■□□□□ 0.35
Sox6P40645 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
Sox6P40645 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Sox6P40645 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC17.24■□□□□ 0.35
Sox6P40645 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Sox6P40645 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Sox6P40645 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC17.24■□□□□ 0.35
Sox6P40645 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Sox6P40645 Gm19439-201ENSMUST00000198195 2273 ntBASIC17.24■□□□□ 0.35
Sox6P40645 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Sox6P40645 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Sox6P40645 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC17.24■□□□□ 0.35
Sox6P40645 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
Sox6P40645 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Sox6P40645 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
Sox6P40645 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC17.24■□□□□ 0.35
Sox6P40645 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Sox6P40645 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Sox6P40645 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Sox6P40645 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Sox6P40645 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Sox6P40645 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC17.23■□□□□ 0.35
Sox6P40645 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC17.23■□□□□ 0.35
Sox6P40645 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Sox6P40645 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Sox6P40645 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Sox6P40645 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Sox6P40645 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
Sox6P40645 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Sox6P40645 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Sox6P40645 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Sox6P40645 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Sox6P40645 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Sox6P40645 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Sox6P40645 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Sox6P40645 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Sox6P40645 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Sox6P40645 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Sox6P40645 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
Sox6P40645 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Sox6P40645 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
Sox6P40645 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC17.22■□□□□ 0.35
Sox6P40645 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Sox6P40645 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Sox6P40645 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Sox6P40645 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Sox6P40645 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC17.21■□□□□ 0.35
Sox6P40645 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
Sox6P40645 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Sox6P40645 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC17.21■□□□□ 0.35
Sox6P40645 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
Sox6P40645 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Sox6P40645 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Sox6P40645 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Sox6P40645 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Sox6P40645 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
Sox6P40645 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
Sox6P40645 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Sox6P40645 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Sox6P40645 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Sox6P40645 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC17.21■□□□□ 0.34
Sox6P40645 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC17.21■□□□□ 0.34
Sox6P40645 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
Sox6P40645 Gm20100-201ENSMUST00000209418 2272 ntBASIC17.21■□□□□ 0.34
Sox6P40645 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Sox6P40645 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
Sox6P40645 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Sox6P40645 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Sox6P40645 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC17.2■□□□□ 0.34
Sox6P40645 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC17.2■□□□□ 0.34
Sox6P40645 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Sox6P40645 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Sox6P40645 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Sox6P40645 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Sox6P40645 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Sox6P40645 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Sox6P40645 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
Sox6P40645 Gm9885-202ENSMUST00000186234 2209 ntBASIC17.2■□□□□ 0.34
Sox6P40645 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 64.1 ms