Protein–RNA interactions for Protein: P39689

Cdkn1a, Cyclin-dependent kinase inhibitor 1, mousemouse

Predictions only

Length 159 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdkn1aP39689 Gm8309-201ENSMUST00000206627 1448 ntBASIC15.17■□□□□ 0.02
Cdkn1aP39689 Dio3-201ENSMUST00000097228 1449 ntBASIC15.17■□□□□ 0.02
Cdkn1aP39689 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cdkn1aP39689 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cdkn1aP39689 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cdkn1aP39689 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC15.17■□□□□ 0.02
Cdkn1aP39689 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC15.17■□□□□ 0.02
Cdkn1aP39689 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC15.17■□□□□ 0.02
Cdkn1aP39689 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cdkn1aP39689 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
Cdkn1aP39689 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cdkn1aP39689 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
Cdkn1aP39689 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Cdkn1aP39689 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
Cdkn1aP39689 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Cdkn1aP39689 Gm2399-201ENSMUST00000104944 225 ntBASIC15.16■□□□□ 0.02
Cdkn1aP39689 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
Cdkn1aP39689 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Cdkn1aP39689 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
Cdkn1aP39689 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
Cdkn1aP39689 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Cdkn1aP39689 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Cdkn1aP39689 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Cdkn1aP39689 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Cdkn1aP39689 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Cdkn1aP39689 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Cdkn1aP39689 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Cdkn1aP39689 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC15.15■□□□□ 0.02
Cdkn1aP39689 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Cdkn1aP39689 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Cdkn1aP39689 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC15.15■□□□□ 0.02
Cdkn1aP39689 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Cdkn1aP39689 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Cdkn1aP39689 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Cdkn1aP39689 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Cdkn1aP39689 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
Cdkn1aP39689 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Cdkn1aP39689 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC15.15■□□□□ 0.02
Cdkn1aP39689 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Cdkn1aP39689 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Cdkn1aP39689 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Cdkn1aP39689 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Cdkn1aP39689 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Cdkn1aP39689 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Cdkn1aP39689 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC15.14■□□□□ 0.01
Cdkn1aP39689 Gm15847-201ENSMUST00000121417 1065 ntBASIC15.14■□□□□ 0.01
Cdkn1aP39689 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Cdkn1aP39689 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
Cdkn1aP39689 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
Cdkn1aP39689 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
Cdkn1aP39689 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Cdkn1aP39689 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Cdkn1aP39689 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Cdkn1aP39689 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Cdkn1aP39689 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC15.13■□□□□ 0.01
Cdkn1aP39689 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Cdkn1aP39689 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Cdkn1aP39689 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
Cdkn1aP39689 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Cdkn1aP39689 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Cdkn1aP39689 Gm11249-201ENSMUST00000117071 859 ntBASIC15.13■□□□□ 0.01
Cdkn1aP39689 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Cdkn1aP39689 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Cdkn1aP39689 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Cdkn1aP39689 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Cdkn1aP39689 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
Cdkn1aP39689 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Cdkn1aP39689 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
Cdkn1aP39689 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Cdkn1aP39689 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Cdkn1aP39689 Gm21596-201ENSMUST00000178049 1316 ntBASIC15.13■□□□□ 0.01
Cdkn1aP39689 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC15.13■□□□□ 0.01
Cdkn1aP39689 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Cdkn1aP39689 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Cdkn1aP39689 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Cdkn1aP39689 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC15.12■□□□□ 0.01
Cdkn1aP39689 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Cdkn1aP39689 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Cdkn1aP39689 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Cdkn1aP39689 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Cdkn1aP39689 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC15.12■□□□□ 0.01
Cdkn1aP39689 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Cdkn1aP39689 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Cdkn1aP39689 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Cdkn1aP39689 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC15.12■□□□□ 0.01
Cdkn1aP39689 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Cdkn1aP39689 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Cdkn1aP39689 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC15.12■□□□□ 0.01
Cdkn1aP39689 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Cdkn1aP39689 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Cdkn1aP39689 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Cdkn1aP39689 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
Cdkn1aP39689 Gm10812-201ENSMUST00000099864 546 ntBASIC15.12■□□□□ 0.01
Cdkn1aP39689 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
Cdkn1aP39689 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
Cdkn1aP39689 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Cdkn1aP39689 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Cdkn1aP39689 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Cdkn1aP39689 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Cdkn1aP39689 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 34.7 ms