Protein–RNA interactions for Protein: P35951

Ldlr, Low-density lipoprotein receptor, mousemouse

Predictions only

Length 862 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LdlrP35951 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC18.27■□□□□ 0.51
LdlrP35951 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC18.27■□□□□ 0.51
LdlrP35951 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
LdlrP35951 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
LdlrP35951 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC18.26■□□□□ 0.51
LdlrP35951 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
LdlrP35951 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
LdlrP35951 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
LdlrP35951 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
LdlrP35951 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
LdlrP35951 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC18.26■□□□□ 0.51
LdlrP35951 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
LdlrP35951 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC18.26■□□□□ 0.51
LdlrP35951 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
LdlrP35951 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
LdlrP35951 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
LdlrP35951 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
LdlrP35951 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
LdlrP35951 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
LdlrP35951 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
LdlrP35951 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
LdlrP35951 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC18.25■□□□□ 0.51
LdlrP35951 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
LdlrP35951 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
LdlrP35951 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
LdlrP35951 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
LdlrP35951 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
LdlrP35951 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
LdlrP35951 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
LdlrP35951 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
LdlrP35951 CT030146.1-201ENSMUST00000220919 217 ntBASIC18.25■□□□□ 0.51
LdlrP35951 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
LdlrP35951 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
LdlrP35951 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
LdlrP35951 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
LdlrP35951 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
LdlrP35951 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
LdlrP35951 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
LdlrP35951 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
LdlrP35951 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
LdlrP35951 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
LdlrP35951 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
LdlrP35951 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
LdlrP35951 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
LdlrP35951 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
LdlrP35951 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
LdlrP35951 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
LdlrP35951 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
LdlrP35951 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
LdlrP35951 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
LdlrP35951 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
LdlrP35951 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
LdlrP35951 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
LdlrP35951 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC18.24■□□□□ 0.51
LdlrP35951 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
LdlrP35951 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
LdlrP35951 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
LdlrP35951 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
LdlrP35951 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
LdlrP35951 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
LdlrP35951 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
LdlrP35951 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC18.23■□□□□ 0.51
LdlrP35951 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC18.23■□□□□ 0.51
LdlrP35951 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
LdlrP35951 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
LdlrP35951 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
LdlrP35951 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
LdlrP35951 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
LdlrP35951 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
LdlrP35951 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
LdlrP35951 Gm12669-201ENSMUST00000122162 1009 ntBASIC18.22■□□□□ 0.51
LdlrP35951 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC18.22■□□□□ 0.51
LdlrP35951 AC137127.1-201ENSMUST00000213466 1078 ntBASIC18.22■□□□□ 0.51
LdlrP35951 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
LdlrP35951 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
LdlrP35951 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
LdlrP35951 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
LdlrP35951 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
LdlrP35951 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC18.22■□□□□ 0.51
LdlrP35951 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
LdlrP35951 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
LdlrP35951 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
LdlrP35951 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
LdlrP35951 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
LdlrP35951 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
LdlrP35951 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
LdlrP35951 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC18.21■□□□□ 0.51
LdlrP35951 Gm5828-201ENSMUST00000071842 1860 ntBASIC18.21■□□□□ 0.51
LdlrP35951 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC18.21■□□□□ 0.51
LdlrP35951 Gm42778-201ENSMUST00000199644 553 ntBASIC18.21■□□□□ 0.51
LdlrP35951 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC18.21■□□□□ 0.51
LdlrP35951 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
LdlrP35951 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
LdlrP35951 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
LdlrP35951 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
LdlrP35951 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
LdlrP35951 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
LdlrP35951 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
LdlrP35951 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
LdlrP35951 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 29.2 ms