Protein–RNA interactions for Protein: P33435

Mmp13, Collagenase 3, mousemouse

Predictions only

Length 472 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp13P33435 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Mmp13P33435 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC18.81■□□□□ 0.6
Mmp13P33435 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Mmp13P33435 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
Mmp13P33435 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Mmp13P33435 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Mmp13P33435 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Mmp13P33435 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Mmp13P33435 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Mmp13P33435 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Mmp13P33435 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Mmp13P33435 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
Mmp13P33435 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Mmp13P33435 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Mmp13P33435 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC18.8■□□□□ 0.6
Mmp13P33435 Slc35b2-207ENSMUST00000226086 850 ntBASIC18.8■□□□□ 0.6
Mmp13P33435 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
Mmp13P33435 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Mmp13P33435 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Mmp13P33435 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Mmp13P33435 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC18.79■□□□□ 0.6
Mmp13P33435 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Mmp13P33435 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Mmp13P33435 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Mmp13P33435 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Mmp13P33435 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC18.79■□□□□ 0.6
Mmp13P33435 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC18.79■□□□□ 0.6
Mmp13P33435 CT030146.1-201ENSMUST00000220919 217 ntBASIC18.79■□□□□ 0.6
Mmp13P33435 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Mmp13P33435 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
Mmp13P33435 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Mmp13P33435 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Mmp13P33435 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
Mmp13P33435 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Mmp13P33435 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
Mmp13P33435 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC18.78■□□□□ 0.6
Mmp13P33435 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Mmp13P33435 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
Mmp13P33435 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Mmp13P33435 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Mmp13P33435 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC18.78■□□□□ 0.6
Mmp13P33435 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Mmp13P33435 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Mmp13P33435 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
Mmp13P33435 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Mmp13P33435 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Mmp13P33435 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Mmp13P33435 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Mmp13P33435 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC18.77■□□□□ 0.6
Mmp13P33435 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC18.77■□□□□ 0.6
Mmp13P33435 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
Mmp13P33435 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Mmp13P33435 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Mmp13P33435 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Mmp13P33435 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Mmp13P33435 Reep4-203ENSMUST00000226563 1444 ntBASIC18.77■□□□□ 0.6
Mmp13P33435 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Mmp13P33435 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Mmp13P33435 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
Mmp13P33435 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC18.77■□□□□ 0.6
Mmp13P33435 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Mmp13P33435 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Mmp13P33435 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Mmp13P33435 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Mmp13P33435 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.59
Mmp13P33435 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Mmp13P33435 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
Mmp13P33435 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Mmp13P33435 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Mmp13P33435 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Mmp13P33435 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
Mmp13P33435 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Mmp13P33435 Gm26571-201ENSMUST00000181399 666 ntBASIC18.76■□□□□ 0.59
Mmp13P33435 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC18.76■□□□□ 0.59
Mmp13P33435 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Mmp13P33435 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
Mmp13P33435 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Mmp13P33435 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Mmp13P33435 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Mmp13P33435 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Mmp13P33435 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC18.76■□□□□ 0.59
Mmp13P33435 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Mmp13P33435 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC18.75■□□□□ 0.59
Mmp13P33435 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Mmp13P33435 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
Mmp13P33435 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Mmp13P33435 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Mmp13P33435 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Mmp13P33435 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
Mmp13P33435 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC18.75■□□□□ 0.59
Mmp13P33435 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Mmp13P33435 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Mmp13P33435 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Mmp13P33435 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
Mmp13P33435 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Mmp13P33435 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Mmp13P33435 Gm13234-201ENSMUST00000120010 747 ntBASIC18.74■□□□□ 0.59
Mmp13P33435 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC18.74■□□□□ 0.59
Mmp13P33435 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
Mmp13P33435 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 17 ms