Protein–RNA interactions for Protein: P31650

Slc6a11, Sodium- and chloride-dependent GABA transporter 3, mousemouse

Predictions only

Length 627 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a11P31650 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Slc6a11P31650 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Slc6a11P31650 Gm42922-201ENSMUST00000195887 2078 ntBASIC17.43■□□□□ 0.38
Slc6a11P31650 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC17.43■□□□□ 0.38
Slc6a11P31650 Dapk1-207ENSMUST00000226059 5009 ntBASIC17.43■□□□□ 0.38
Slc6a11P31650 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Slc6a11P31650 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC17.43■□□□□ 0.38
Slc6a11P31650 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
Slc6a11P31650 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
Slc6a11P31650 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Slc6a11P31650 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC17.43■□□□□ 0.38
Slc6a11P31650 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Slc6a11P31650 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Slc6a11P31650 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
Slc6a11P31650 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
Slc6a11P31650 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
Slc6a11P31650 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Slc6a11P31650 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Slc6a11P31650 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Slc6a11P31650 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC17.42■□□□□ 0.38
Slc6a11P31650 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
Slc6a11P31650 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Slc6a11P31650 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Slc6a11P31650 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
Slc6a11P31650 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Slc6a11P31650 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Slc6a11P31650 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Slc6a11P31650 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Slc6a11P31650 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Slc6a11P31650 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Slc6a11P31650 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
Slc6a11P31650 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Slc6a11P31650 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC17.41■□□□□ 0.38
Slc6a11P31650 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Slc6a11P31650 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Slc6a11P31650 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Slc6a11P31650 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Slc6a11P31650 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
Slc6a11P31650 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
Slc6a11P31650 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Slc6a11P31650 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Slc6a11P31650 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Slc6a11P31650 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC17.4■□□□□ 0.38
Slc6a11P31650 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Slc6a11P31650 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Slc6a11P31650 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
Slc6a11P31650 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Slc6a11P31650 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
Slc6a11P31650 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
Slc6a11P31650 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Slc6a11P31650 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC17.4■□□□□ 0.38
Slc6a11P31650 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC17.4■□□□□ 0.38
Slc6a11P31650 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Slc6a11P31650 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
Slc6a11P31650 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
Slc6a11P31650 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Slc6a11P31650 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
Slc6a11P31650 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Slc6a11P31650 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
Slc6a11P31650 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC17.39■□□□□ 0.38
Slc6a11P31650 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.38
Slc6a11P31650 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
Slc6a11P31650 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Slc6a11P31650 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC17.39■□□□□ 0.37
Slc6a11P31650 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC17.39■□□□□ 0.37
Slc6a11P31650 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Slc6a11P31650 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Slc6a11P31650 CT030146.1-201ENSMUST00000220919 217 ntBASIC17.39■□□□□ 0.37
Slc6a11P31650 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC17.39■□□□□ 0.37
Slc6a11P31650 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Slc6a11P31650 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
Slc6a11P31650 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Slc6a11P31650 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
Slc6a11P31650 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Slc6a11P31650 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Slc6a11P31650 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Slc6a11P31650 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Slc6a11P31650 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Slc6a11P31650 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
Slc6a11P31650 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
Slc6a11P31650 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Slc6a11P31650 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Slc6a11P31650 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Slc6a11P31650 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Slc6a11P31650 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Slc6a11P31650 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC17.37■□□□□ 0.37
Slc6a11P31650 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Slc6a11P31650 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC17.37■□□□□ 0.37
Slc6a11P31650 Gm9988-201ENSMUST00000069786 435 ntBASIC17.37■□□□□ 0.37
Slc6a11P31650 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC17.37■□□□□ 0.37
Slc6a11P31650 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
Slc6a11P31650 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Slc6a11P31650 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Slc6a11P31650 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
Slc6a11P31650 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Slc6a11P31650 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Slc6a11P31650 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Slc6a11P31650 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Slc6a11P31650 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
Slc6a11P31650 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 47.2 ms