Protein–RNA interactions for Protein: P31648

Slc6a1, Sodium- and chloride-dependent GABA transporter 1, mousemouse

Predictions only

Length 599 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a1P31648 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC15.81■□□□□ 0.12
Slc6a1P31648 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Slc6a1P31648 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Slc6a1P31648 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Slc6a1P31648 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Slc6a1P31648 Gm43759-201ENSMUST00000196925 1261 ntBASIC15.81■□□□□ 0.12
Slc6a1P31648 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Slc6a1P31648 AC154266.1-201ENSMUST00000223190 503 ntBASIC15.81■□□□□ 0.12
Slc6a1P31648 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
Slc6a1P31648 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Slc6a1P31648 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Slc6a1P31648 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Slc6a1P31648 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Slc6a1P31648 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC15.8■□□□□ 0.12
Slc6a1P31648 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Slc6a1P31648 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC15.8■□□□□ 0.12
Slc6a1P31648 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Slc6a1P31648 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Slc6a1P31648 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC15.8■□□□□ 0.12
Slc6a1P31648 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Slc6a1P31648 Gm15743-202ENSMUST00000182690 1901 ntBASIC15.8■□□□□ 0.12
Slc6a1P31648 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Slc6a1P31648 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Slc6a1P31648 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Slc6a1P31648 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Slc6a1P31648 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Slc6a1P31648 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Slc6a1P31648 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Slc6a1P31648 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
Slc6a1P31648 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Slc6a1P31648 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Slc6a1P31648 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Slc6a1P31648 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Slc6a1P31648 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Slc6a1P31648 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Slc6a1P31648 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC15.78■□□□□ 0.12
Slc6a1P31648 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
Slc6a1P31648 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
Slc6a1P31648 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Slc6a1P31648 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Slc6a1P31648 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Slc6a1P31648 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Slc6a1P31648 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Slc6a1P31648 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Slc6a1P31648 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Slc6a1P31648 Gm27454-201ENSMUST00000185090 204 ntBASIC15.78■□□□□ 0.12
Slc6a1P31648 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Slc6a1P31648 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Slc6a1P31648 Gm43294-201ENSMUST00000202850 2490 ntBASIC15.78■□□□□ 0.12
Slc6a1P31648 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Slc6a1P31648 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Slc6a1P31648 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Slc6a1P31648 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC15.78■□□□□ 0.12
Slc6a1P31648 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Slc6a1P31648 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC15.78■□□□□ 0.12
Slc6a1P31648 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Slc6a1P31648 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
Slc6a1P31648 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Slc6a1P31648 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Slc6a1P31648 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Slc6a1P31648 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.12
Slc6a1P31648 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Slc6a1P31648 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.12
Slc6a1P31648 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Slc6a1P31648 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Slc6a1P31648 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Slc6a1P31648 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC15.77■□□□□ 0.12
Slc6a1P31648 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Slc6a1P31648 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC15.77■□□□□ 0.12
Slc6a1P31648 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Slc6a1P31648 Gm10657-201ENSMUST00000193528 1031 ntBASIC15.77■□□□□ 0.12
Slc6a1P31648 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
Slc6a1P31648 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Slc6a1P31648 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC15.77■□□□□ 0.12
Slc6a1P31648 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Slc6a1P31648 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Slc6a1P31648 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Slc6a1P31648 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC15.77■□□□□ 0.11
Slc6a1P31648 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Slc6a1P31648 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC15.77■□□□□ 0.11
Slc6a1P31648 Gm43672-201ENSMUST00000199072 1731 ntBASIC15.77■□□□□ 0.11
Slc6a1P31648 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.11
Slc6a1P31648 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Slc6a1P31648 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Slc6a1P31648 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Slc6a1P31648 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Slc6a1P31648 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Slc6a1P31648 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Slc6a1P31648 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Slc6a1P31648 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Slc6a1P31648 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Slc6a1P31648 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Slc6a1P31648 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
Slc6a1P31648 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Slc6a1P31648 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Slc6a1P31648 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Slc6a1P31648 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Slc6a1P31648 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
Slc6a1P31648 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC15.75■□□□□ 0.11
Slc6a1P31648 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Retrieved 100 of 76,532 protein–RNA pairs in 16.5 ms