Protein–RNA interactions for Protein: P28481

Col2a1, Collagen alpha-1(II) chain, mousemouse

Predictions only

Length 1,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col2a1P28481 Rncr4-201ENSMUST00000194541 2234 ntBASIC21.03■□□□□ 0.96
Col2a1P28481 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Col2a1P28481 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC21.03■□□□□ 0.96
Col2a1P28481 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC21.03■□□□□ 0.96
Col2a1P28481 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
Col2a1P28481 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Col2a1P28481 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Col2a1P28481 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Col2a1P28481 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Col2a1P28481 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
Col2a1P28481 Gm43545-201ENSMUST00000196765 2779 ntBASIC21.02■□□□□ 0.96
Col2a1P28481 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.96
Col2a1P28481 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC21.02■□□□□ 0.96
Col2a1P28481 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Col2a1P28481 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Col2a1P28481 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC21.02■□□□□ 0.96
Col2a1P28481 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC21.02■□□□□ 0.96
Col2a1P28481 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
Col2a1P28481 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
Col2a1P28481 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
Col2a1P28481 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Col2a1P28481 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC21.01■□□□□ 0.95
Col2a1P28481 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Col2a1P28481 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Col2a1P28481 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Col2a1P28481 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Col2a1P28481 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
Col2a1P28481 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Col2a1P28481 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Col2a1P28481 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
Col2a1P28481 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC21.01■□□□□ 0.95
Col2a1P28481 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Col2a1P28481 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Col2a1P28481 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Col2a1P28481 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Col2a1P28481 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
Col2a1P28481 Gm12382-201ENSMUST00000122005 922 ntBASIC21.01■□□□□ 0.95
Col2a1P28481 Gm16042-201ENSMUST00000204813 1247 ntBASIC21.01■□□□□ 0.95
Col2a1P28481 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Col2a1P28481 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Col2a1P28481 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
Col2a1P28481 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Col2a1P28481 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC21■□□□□ 0.95
Col2a1P28481 Gm10654-201ENSMUST00000098653 1633 ntBASIC21■□□□□ 0.95
Col2a1P28481 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Col2a1P28481 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC21■□□□□ 0.95
Col2a1P28481 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC21■□□□□ 0.95
Col2a1P28481 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Col2a1P28481 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Col2a1P28481 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Col2a1P28481 AC121961.1-201ENSMUST00000218594 1779 ntBASIC20.99■□□□□ 0.95
Col2a1P28481 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Col2a1P28481 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Col2a1P28481 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Col2a1P28481 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Col2a1P28481 AC166341.7-201ENSMUST00000221698 126 ntBASIC20.99■□□□□ 0.95
Col2a1P28481 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Col2a1P28481 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC20.99■□□□□ 0.95
Col2a1P28481 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
Col2a1P28481 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Col2a1P28481 Gm15565-201ENSMUST00000118890 427 ntBASIC20.98■□□□□ 0.95
Col2a1P28481 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Col2a1P28481 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Col2a1P28481 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Col2a1P28481 AC124581.1-201ENSMUST00000225416 1399 ntBASIC20.98■□□□□ 0.95
Col2a1P28481 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Col2a1P28481 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Col2a1P28481 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Col2a1P28481 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Col2a1P28481 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Col2a1P28481 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC20.97■□□□□ 0.95
Col2a1P28481 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
Col2a1P28481 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC20.97■□□□□ 0.95
Col2a1P28481 AC135963.1-201ENSMUST00000211640 717 ntBASIC20.97■□□□□ 0.95
Col2a1P28481 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Col2a1P28481 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Col2a1P28481 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
Col2a1P28481 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
Col2a1P28481 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
Col2a1P28481 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Col2a1P28481 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC20.96■□□□□ 0.95
Col2a1P28481 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC20.96■□□□□ 0.95
Col2a1P28481 Krtap5-1-202ENSMUST00000188274 742 ntBASIC20.96■□□□□ 0.95
Col2a1P28481 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Col2a1P28481 Odf3b-204ENSMUST00000227834 930 ntBASIC20.96■□□□□ 0.95
Col2a1P28481 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Col2a1P28481 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Col2a1P28481 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Col2a1P28481 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Col2a1P28481 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Col2a1P28481 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Col2a1P28481 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC20.96■□□□□ 0.95
Col2a1P28481 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Col2a1P28481 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Col2a1P28481 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Col2a1P28481 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Col2a1P28481 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Col2a1P28481 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
Col2a1P28481 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Col2a1P28481 Gm29994-201ENSMUST00000195495 1193 ntBASIC20.95■□□□□ 0.94
Retrieved 100 of 76,532 protein–RNA pairs in 17.5 ms