Protein–RNA interactions for Protein: P25799

Nfkb1, Nuclear factor NF-kappa-B p105 subunit, mousemouse

Predictions only

Length 971 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nfkb1P25799 Gm15847-201ENSMUST00000121417 1065 ntBASIC18.88■□□□□ 0.61
Nfkb1P25799 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Nfkb1P25799 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC18.88■□□□□ 0.61
Nfkb1P25799 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Nfkb1P25799 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
Nfkb1P25799 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
Nfkb1P25799 Gm18688-201ENSMUST00000204695 1859 ntBASIC18.88■□□□□ 0.61
Nfkb1P25799 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Nfkb1P25799 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Nfkb1P25799 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Nfkb1P25799 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC18.88■□□□□ 0.61
Nfkb1P25799 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Nfkb1P25799 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Nfkb1P25799 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Nfkb1P25799 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Nfkb1P25799 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Nfkb1P25799 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Nfkb1P25799 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC18.87■□□□□ 0.61
Nfkb1P25799 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Nfkb1P25799 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Nfkb1P25799 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Nfkb1P25799 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Nfkb1P25799 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Nfkb1P25799 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Nfkb1P25799 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Nfkb1P25799 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Nfkb1P25799 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
Nfkb1P25799 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Nfkb1P25799 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Nfkb1P25799 Gm8309-201ENSMUST00000206627 1448 ntBASIC18.86■□□□□ 0.61
Nfkb1P25799 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Nfkb1P25799 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC18.86■□□□□ 0.61
Nfkb1P25799 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC18.86■□□□□ 0.61
Nfkb1P25799 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Nfkb1P25799 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Nfkb1P25799 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Nfkb1P25799 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Nfkb1P25799 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Nfkb1P25799 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Nfkb1P25799 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC18.85■□□□□ 0.61
Nfkb1P25799 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC18.85■□□□□ 0.61
Nfkb1P25799 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Nfkb1P25799 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Nfkb1P25799 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Nfkb1P25799 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
Nfkb1P25799 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Nfkb1P25799 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Nfkb1P25799 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Nfkb1P25799 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Nfkb1P25799 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC18.84■□□□□ 0.61
Nfkb1P25799 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Nfkb1P25799 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Nfkb1P25799 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC18.84■□□□□ 0.61
Nfkb1P25799 Gm13181-201ENSMUST00000120117 1069 ntBASIC18.84■□□□□ 0.61
Nfkb1P25799 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Nfkb1P25799 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Nfkb1P25799 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Nfkb1P25799 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Nfkb1P25799 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
Nfkb1P25799 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC18.84■□□□□ 0.61
Nfkb1P25799 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Nfkb1P25799 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
Nfkb1P25799 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC18.84■□□□□ 0.61
Nfkb1P25799 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
Nfkb1P25799 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Nfkb1P25799 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Nfkb1P25799 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Nfkb1P25799 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Nfkb1P25799 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
Nfkb1P25799 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Nfkb1P25799 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Nfkb1P25799 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
Nfkb1P25799 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Nfkb1P25799 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Nfkb1P25799 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Nfkb1P25799 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Nfkb1P25799 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC18.82■□□□□ 0.6
Nfkb1P25799 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Nfkb1P25799 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
Nfkb1P25799 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Nfkb1P25799 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC18.82■□□□□ 0.6
Nfkb1P25799 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC18.82■□□□□ 0.6
Nfkb1P25799 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Nfkb1P25799 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Nfkb1P25799 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Nfkb1P25799 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Nfkb1P25799 Gm18666-201ENSMUST00000190039 958 ntBASIC18.81■□□□□ 0.6
Nfkb1P25799 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Nfkb1P25799 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC18.81■□□□□ 0.6
Nfkb1P25799 Wnt10b-205ENSMUST00000226846 1204 ntBASIC18.81■□□□□ 0.6
Nfkb1P25799 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Nfkb1P25799 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Nfkb1P25799 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Nfkb1P25799 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Nfkb1P25799 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC18.81■□□□□ 0.6
Nfkb1P25799 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC18.81■□□□□ 0.6
Nfkb1P25799 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
Nfkb1P25799 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC18.81■□□□□ 0.6
Nfkb1P25799 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC18.8■□□□□ 0.6
Nfkb1P25799 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 25.8 ms