Protein–RNA interactions for Protein: P20334

Tnfrsf9, Tumor necrosis factor receptor superfamily member 9, mousemouse

Predictions only

Length 256 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf9P20334 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Tnfrsf9P20334 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
Tnfrsf9P20334 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Tnfrsf9P20334 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Tnfrsf9P20334 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Tnfrsf9P20334 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
Tnfrsf9P20334 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
Tnfrsf9P20334 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Tnfrsf9P20334 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Tnfrsf9P20334 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Tnfrsf9P20334 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Tnfrsf9P20334 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
Tnfrsf9P20334 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Tnfrsf9P20334 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC14.9□□□□□ -0.02
Tnfrsf9P20334 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Tnfrsf9P20334 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Tnfrsf9P20334 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Tnfrsf9P20334 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Tnfrsf9P20334 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
Tnfrsf9P20334 Gm42911-201ENSMUST00000199360 1630 ntBASIC14.89□□□□□ -0.03
Tnfrsf9P20334 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
Tnfrsf9P20334 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC14.89□□□□□ -0.03
Tnfrsf9P20334 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC14.89□□□□□ -0.03
Tnfrsf9P20334 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC14.89□□□□□ -0.03
Tnfrsf9P20334 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC14.89□□□□□ -0.03
Tnfrsf9P20334 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
Tnfrsf9P20334 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Tnfrsf9P20334 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Tnfrsf9P20334 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Tnfrsf9P20334 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
Tnfrsf9P20334 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Tnfrsf9P20334 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
Tnfrsf9P20334 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Tnfrsf9P20334 Zfand6-208ENSMUST00000209117 2955 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Tnfrsf9P20334 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC14.88□□□□□ -0.03
Tnfrsf9P20334 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
Tnfrsf9P20334 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC14.88□□□□□ -0.03
Tnfrsf9P20334 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Tnfrsf9P20334 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Tnfrsf9P20334 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Tnfrsf9P20334 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC14.88□□□□□ -0.03
Tnfrsf9P20334 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Tnfrsf9P20334 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Tnfrsf9P20334 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
Tnfrsf9P20334 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
Tnfrsf9P20334 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Tnfrsf9P20334 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Tnfrsf9P20334 H2afy2-201ENSMUST00000020283 2175 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Tnfrsf9P20334 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Tnfrsf9P20334 Gm13534-201ENSMUST00000121169 513 ntBASIC14.87□□□□□ -0.03
Tnfrsf9P20334 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
Tnfrsf9P20334 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC14.87□□□□□ -0.03
Tnfrsf9P20334 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC14.87□□□□□ -0.03
Tnfrsf9P20334 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Tnfrsf9P20334 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Tnfrsf9P20334 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Tnfrsf9P20334 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Tnfrsf9P20334 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Tnfrsf9P20334 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Tnfrsf9P20334 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Tnfrsf9P20334 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Tnfrsf9P20334 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Tnfrsf9P20334 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Tnfrsf9P20334 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Tnfrsf9P20334 Samd4-211ENSMUST00000228404 3039 ntAPPRIS ALT2 BASIC14.87□□□□□ -0.03
Tnfrsf9P20334 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Tnfrsf9P20334 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC14.87□□□□□ -0.03
Tnfrsf9P20334 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Tnfrsf9P20334 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Tnfrsf9P20334 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Tnfrsf9P20334 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Tnfrsf9P20334 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Tnfrsf9P20334 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Tnfrsf9P20334 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Tnfrsf9P20334 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
Tnfrsf9P20334 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
Tnfrsf9P20334 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC14.86□□□□□ -0.03
Tnfrsf9P20334 Gm19439-201ENSMUST00000198195 2273 ntBASIC14.86□□□□□ -0.03
Tnfrsf9P20334 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Tnfrsf9P20334 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
Tnfrsf9P20334 Arntl-201ENSMUST00000047321 2908 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Tnfrsf9P20334 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
Tnfrsf9P20334 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Tnfrsf9P20334 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC14.85□□□□□ -0.03
Tnfrsf9P20334 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC14.85□□□□□ -0.03
Tnfrsf9P20334 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC14.85□□□□□ -0.03
Tnfrsf9P20334 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Tnfrsf9P20334 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC14.85□□□□□ -0.03
Tnfrsf9P20334 Krtap5-1-202ENSMUST00000188274 742 ntBASIC14.85□□□□□ -0.03
Tnfrsf9P20334 Arhgef33-211ENSMUST00000225658 473 ntBASIC14.85□□□□□ -0.03
Tnfrsf9P20334 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Tnfrsf9P20334 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Tnfrsf9P20334 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Tnfrsf9P20334 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
Tnfrsf9P20334 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Tnfrsf9P20334 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Tnfrsf9P20334 Gm28756-202ENSMUST00000209405 2461 ntTSL 5 BASIC14.85□□□□□ -0.03
Tnfrsf9P20334 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Tnfrsf9P20334 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC14.85□□□□□ -0.03
Tnfrsf9P20334 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC14.85□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 57.9 ms