Protein–RNA interactions for Protein: P0C0A3

Chmp6, Charged multivesicular body protein 6, mousemouse

Predictions only

Length 200 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp6P0C0A3 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Chmp6P0C0A3 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC19.98■□□□□ 0.79
Chmp6P0C0A3 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC19.98■□□□□ 0.79
Chmp6P0C0A3 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC19.98■□□□□ 0.79
Chmp6P0C0A3 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Chmp6P0C0A3 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Chmp6P0C0A3 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC19.97■□□□□ 0.79
Chmp6P0C0A3 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Chmp6P0C0A3 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Chmp6P0C0A3 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Chmp6P0C0A3 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Chmp6P0C0A3 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Chmp6P0C0A3 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Chmp6P0C0A3 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Chmp6P0C0A3 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC19.96■□□□□ 0.79
Chmp6P0C0A3 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Chmp6P0C0A3 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Chmp6P0C0A3 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Chmp6P0C0A3 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Chmp6P0C0A3 Fam105a-203ENSMUST00000226170 3043 ntBASIC19.96■□□□□ 0.79
Chmp6P0C0A3 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC19.96■□□□□ 0.79
Chmp6P0C0A3 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC19.96■□□□□ 0.79
Chmp6P0C0A3 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Chmp6P0C0A3 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC19.95■□□□□ 0.78
Chmp6P0C0A3 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Chmp6P0C0A3 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Chmp6P0C0A3 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Chmp6P0C0A3 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
Chmp6P0C0A3 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC19.95■□□□□ 0.78
Chmp6P0C0A3 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Chmp6P0C0A3 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC19.95■□□□□ 0.78
Chmp6P0C0A3 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Chmp6P0C0A3 Gm29257-201ENSMUST00000186115 639 ntBASIC19.95■□□□□ 0.78
Chmp6P0C0A3 AC124603.1-201ENSMUST00000223843 308 ntBASIC19.95■□□□□ 0.78
Chmp6P0C0A3 Gm6365-201ENSMUST00000054711 744 ntBASIC19.95■□□□□ 0.78
Chmp6P0C0A3 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Chmp6P0C0A3 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Chmp6P0C0A3 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC19.95■□□□□ 0.78
Chmp6P0C0A3 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Chmp6P0C0A3 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Chmp6P0C0A3 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Chmp6P0C0A3 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Chmp6P0C0A3 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Chmp6P0C0A3 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC19.94■□□□□ 0.78
Chmp6P0C0A3 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC19.94■□□□□ 0.78
Chmp6P0C0A3 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Chmp6P0C0A3 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Chmp6P0C0A3 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Chmp6P0C0A3 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Chmp6P0C0A3 Gm42555-201ENSMUST00000199304 1039 ntBASIC19.94■□□□□ 0.78
Chmp6P0C0A3 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Chmp6P0C0A3 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
Chmp6P0C0A3 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Chmp6P0C0A3 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Chmp6P0C0A3 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
Chmp6P0C0A3 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Chmp6P0C0A3 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Chmp6P0C0A3 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
Chmp6P0C0A3 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Chmp6P0C0A3 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC19.93■□□□□ 0.78
Chmp6P0C0A3 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Chmp6P0C0A3 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Chmp6P0C0A3 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Chmp6P0C0A3 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
Chmp6P0C0A3 AC131586.2-201ENSMUST00000228370 1512 ntBASIC19.93■□□□□ 0.78
Chmp6P0C0A3 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Chmp6P0C0A3 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Chmp6P0C0A3 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Chmp6P0C0A3 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC19.93■□□□□ 0.78
Chmp6P0C0A3 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
Chmp6P0C0A3 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Chmp6P0C0A3 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Chmp6P0C0A3 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Chmp6P0C0A3 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Chmp6P0C0A3 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC19.92■□□□□ 0.78
Chmp6P0C0A3 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Chmp6P0C0A3 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
Chmp6P0C0A3 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Chmp6P0C0A3 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Chmp6P0C0A3 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC19.92■□□□□ 0.78
Chmp6P0C0A3 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC19.92■□□□□ 0.78
Chmp6P0C0A3 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Chmp6P0C0A3 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Chmp6P0C0A3 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Chmp6P0C0A3 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Chmp6P0C0A3 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC19.92■□□□□ 0.78
Chmp6P0C0A3 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Chmp6P0C0A3 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Chmp6P0C0A3 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC19.92■□□□□ 0.78
Chmp6P0C0A3 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Chmp6P0C0A3 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Chmp6P0C0A3 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Chmp6P0C0A3 Rarb-207ENSMUST00000225921 2756 ntBASIC19.91■□□□□ 0.78
Chmp6P0C0A3 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC19.91■□□□□ 0.78
Chmp6P0C0A3 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC19.91■□□□□ 0.78
Chmp6P0C0A3 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Chmp6P0C0A3 Gm10602-201ENSMUST00000098239 609 ntBASIC19.91■□□□□ 0.78
Chmp6P0C0A3 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
Chmp6P0C0A3 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Chmp6P0C0A3 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Retrieved 100 of 76,532 protein–RNA pairs in 26 ms