Protein–RNA interactions for Protein: P05622

Pdgfrb, Platelet-derived growth factor receptor beta, mousemouse

Predictions only

Length 1,098 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PdgfrbP05622 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
PdgfrbP05622 Gm27405-201ENSMUST00000184201 112 ntBASIC18.56■□□□□ 0.56
PdgfrbP05622 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC18.56■□□□□ 0.56
PdgfrbP05622 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC18.56■□□□□ 0.56
PdgfrbP05622 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
PdgfrbP05622 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
PdgfrbP05622 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
PdgfrbP05622 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
PdgfrbP05622 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
PdgfrbP05622 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
PdgfrbP05622 Fam105a-203ENSMUST00000226170 3043 ntBASIC18.55■□□□□ 0.56
PdgfrbP05622 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
PdgfrbP05622 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
PdgfrbP05622 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
PdgfrbP05622 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
PdgfrbP05622 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC18.55■□□□□ 0.56
PdgfrbP05622 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC18.55■□□□□ 0.56
PdgfrbP05622 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
PdgfrbP05622 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
PdgfrbP05622 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
PdgfrbP05622 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
PdgfrbP05622 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
PdgfrbP05622 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
PdgfrbP05622 Gm37805-201ENSMUST00000192612 1094 ntBASIC18.54■□□□□ 0.56
PdgfrbP05622 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
PdgfrbP05622 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
PdgfrbP05622 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC18.54■□□□□ 0.56
PdgfrbP05622 AC160393.1-201ENSMUST00000218378 1279 ntBASIC18.54■□□□□ 0.56
PdgfrbP05622 Gm43672-201ENSMUST00000199072 1731 ntBASIC18.54■□□□□ 0.56
PdgfrbP05622 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
PdgfrbP05622 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
PdgfrbP05622 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
PdgfrbP05622 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
PdgfrbP05622 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC18.53■□□□□ 0.56
PdgfrbP05622 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
PdgfrbP05622 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
PdgfrbP05622 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
PdgfrbP05622 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC18.53■□□□□ 0.56
PdgfrbP05622 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
PdgfrbP05622 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC18.53■□□□□ 0.56
PdgfrbP05622 Gm45906-201ENSMUST00000208911 1430 ntBASIC18.53■□□□□ 0.56
PdgfrbP05622 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
PdgfrbP05622 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
PdgfrbP05622 Gm6365-201ENSMUST00000054711 744 ntBASIC18.53■□□□□ 0.56
PdgfrbP05622 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
PdgfrbP05622 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
PdgfrbP05622 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
PdgfrbP05622 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
PdgfrbP05622 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
PdgfrbP05622 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
PdgfrbP05622 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
PdgfrbP05622 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
PdgfrbP05622 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC18.52■□□□□ 0.56
PdgfrbP05622 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
PdgfrbP05622 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC18.52■□□□□ 0.56
PdgfrbP05622 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
PdgfrbP05622 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC18.52■□□□□ 0.56
PdgfrbP05622 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
PdgfrbP05622 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
PdgfrbP05622 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
PdgfrbP05622 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
PdgfrbP05622 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.56
PdgfrbP05622 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
PdgfrbP05622 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC18.52■□□□□ 0.56
PdgfrbP05622 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
PdgfrbP05622 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
PdgfrbP05622 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
PdgfrbP05622 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
PdgfrbP05622 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
PdgfrbP05622 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC18.51■□□□□ 0.55
PdgfrbP05622 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
PdgfrbP05622 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
PdgfrbP05622 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
PdgfrbP05622 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
PdgfrbP05622 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
PdgfrbP05622 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
PdgfrbP05622 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC18.51■□□□□ 0.55
PdgfrbP05622 Gm7291-201ENSMUST00000199147 382 ntBASIC18.51■□□□□ 0.55
PdgfrbP05622 AC107452.1-201ENSMUST00000227963 481 ntBASIC18.51■□□□□ 0.55
PdgfrbP05622 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
PdgfrbP05622 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
PdgfrbP05622 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
PdgfrbP05622 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
PdgfrbP05622 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
PdgfrbP05622 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
PdgfrbP05622 Gm43213-201ENSMUST00000151866 1790 ntBASIC18.5■□□□□ 0.55
PdgfrbP05622 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
PdgfrbP05622 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC18.5■□□□□ 0.55
PdgfrbP05622 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
PdgfrbP05622 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC18.5■□□□□ 0.55
PdgfrbP05622 Gm42555-201ENSMUST00000199304 1039 ntBASIC18.5■□□□□ 0.55
PdgfrbP05622 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC18.5■□□□□ 0.55
PdgfrbP05622 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC18.5■□□□□ 0.55
PdgfrbP05622 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
PdgfrbP05622 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC18.5■□□□□ 0.55
PdgfrbP05622 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
PdgfrbP05622 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
PdgfrbP05622 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
PdgfrbP05622 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
PdgfrbP05622 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC18.49■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 17.6 ms