Protein–RNA interactions for Protein: P03953

Cfd, Complement factor D, mousemouse

Predictions only

Length 259 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CfdP03953 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
CfdP03953 4930474N05Rik-203ENSMUST00000226305 2313 ntAPPRIS P1 BASIC15.35■□□□□ 0.05
CfdP03953 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
CfdP03953 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
CfdP03953 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
CfdP03953 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CfdP03953 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
CfdP03953 Gm45412-201ENSMUST00000210217 2275 ntBASIC15.35■□□□□ 0.05
CfdP03953 Gm7860-201ENSMUST00000121190 879 ntBASIC15.35■□□□□ 0.05
CfdP03953 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC15.35■□□□□ 0.05
CfdP03953 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC15.35■□□□□ 0.05
CfdP03953 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CfdP03953 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CfdP03953 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
CfdP03953 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CfdP03953 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CfdP03953 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
CfdP03953 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CfdP03953 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CfdP03953 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CfdP03953 Gm37194-201ENSMUST00000193092 3031 ntBASIC15.35■□□□□ 0.05
CfdP03953 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CfdP03953 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CfdP03953 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CfdP03953 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
CfdP03953 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CfdP03953 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
CfdP03953 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC15.34■□□□□ 0.05
CfdP03953 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
CfdP03953 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CfdP03953 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CfdP03953 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC15.34■□□□□ 0.05
CfdP03953 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
CfdP03953 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
CfdP03953 Gm15820-201ENSMUST00000201566 728 ntBASIC15.34■□□□□ 0.05
CfdP03953 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC15.34■□□□□ 0.05
CfdP03953 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
CfdP03953 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CfdP03953 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
CfdP03953 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CfdP03953 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
CfdP03953 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
CfdP03953 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
CfdP03953 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
CfdP03953 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC15.34■□□□□ 0.05
CfdP03953 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CfdP03953 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
CfdP03953 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
CfdP03953 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.05
CfdP03953 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC15.33■□□□□ 0.05
CfdP03953 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
CfdP03953 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.05
CfdP03953 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CfdP03953 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
CfdP03953 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC15.33■□□□□ 0.04
CfdP03953 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC15.33■□□□□ 0.04
CfdP03953 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
CfdP03953 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CfdP03953 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
CfdP03953 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CfdP03953 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CfdP03953 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CfdP03953 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
CfdP03953 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CfdP03953 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CfdP03953 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
CfdP03953 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC15.33■□□□□ 0.04
CfdP03953 Gm9194-201ENSMUST00000220749 1447 ntBASIC15.33■□□□□ 0.04
CfdP03953 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CfdP03953 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
CfdP03953 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CfdP03953 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
CfdP03953 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CfdP03953 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
CfdP03953 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC15.32■□□□□ 0.04
CfdP03953 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CfdP03953 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
CfdP03953 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CfdP03953 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CfdP03953 AC121961.1-201ENSMUST00000218594 1779 ntBASIC15.31■□□□□ 0.04
CfdP03953 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CfdP03953 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CfdP03953 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
CfdP03953 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
CfdP03953 Gm43338-201ENSMUST00000198617 2223 ntBASIC15.31■□□□□ 0.04
CfdP03953 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC15.31■□□□□ 0.04
CfdP03953 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC15.31■□□□□ 0.04
CfdP03953 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CfdP03953 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC15.31■□□□□ 0.04
CfdP03953 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CfdP03953 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CfdP03953 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CfdP03953 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CfdP03953 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
CfdP03953 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
CfdP03953 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CfdP03953 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
CfdP03953 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CfdP03953 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CfdP03953 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 32.7 ms