Protein–RNA interactions for Protein: O89029

Matn4, Matrilin-4, mousemouse

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Matn4O89029 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Matn4O89029 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
Matn4O89029 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
Matn4O89029 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Matn4O89029 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Matn4O89029 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC17.38■□□□□ 0.37
Matn4O89029 Gm26971-201ENSMUST00000182423 1072 ntBASIC17.38■□□□□ 0.37
Matn4O89029 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC17.38■□□□□ 0.37
Matn4O89029 Gm40848-201ENSMUST00000221998 324 ntBASIC17.38■□□□□ 0.37
Matn4O89029 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC17.38■□□□□ 0.37
Matn4O89029 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Matn4O89029 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Matn4O89029 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Matn4O89029 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Matn4O89029 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
Matn4O89029 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Matn4O89029 Gm8309-201ENSMUST00000206627 1448 ntBASIC17.38■□□□□ 0.37
Matn4O89029 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC17.37■□□□□ 0.37
Matn4O89029 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Matn4O89029 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Matn4O89029 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
Matn4O89029 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Matn4O89029 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC17.37■□□□□ 0.37
Matn4O89029 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Matn4O89029 Gm26833-201ENSMUST00000180899 440 ntBASIC17.37■□□□□ 0.37
Matn4O89029 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Matn4O89029 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Matn4O89029 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Matn4O89029 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Matn4O89029 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC17.37■□□□□ 0.37
Matn4O89029 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Matn4O89029 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Matn4O89029 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Matn4O89029 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Matn4O89029 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC17.36■□□□□ 0.37
Matn4O89029 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
Matn4O89029 Fcho2-208ENSMUST00000224992 2964 ntBASIC17.36■□□□□ 0.37
Matn4O89029 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC17.36■□□□□ 0.37
Matn4O89029 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC17.36■□□□□ 0.37
Matn4O89029 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC17.36■□□□□ 0.37
Matn4O89029 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Matn4O89029 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Matn4O89029 Gm6139-201ENSMUST00000079261 882 ntBASIC17.36■□□□□ 0.37
Matn4O89029 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC17.36■□□□□ 0.37
Matn4O89029 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Matn4O89029 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Matn4O89029 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Matn4O89029 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Matn4O89029 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC17.35■□□□□ 0.37
Matn4O89029 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC17.35■□□□□ 0.37
Matn4O89029 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Matn4O89029 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Matn4O89029 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Matn4O89029 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Matn4O89029 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Matn4O89029 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Matn4O89029 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Matn4O89029 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Matn4O89029 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Matn4O89029 Tgds-204ENSMUST00000228543 1594 ntBASIC17.35■□□□□ 0.37
Matn4O89029 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC17.35■□□□□ 0.37
Matn4O89029 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC17.35■□□□□ 0.37
Matn4O89029 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Matn4O89029 Zcchc6-207ENSMUST00000225576 2499 ntBASIC17.35■□□□□ 0.37
Matn4O89029 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC17.34■□□□□ 0.37
Matn4O89029 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
Matn4O89029 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Matn4O89029 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Matn4O89029 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
Matn4O89029 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Matn4O89029 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Matn4O89029 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Matn4O89029 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Matn4O89029 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Matn4O89029 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Matn4O89029 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
Matn4O89029 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
Matn4O89029 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Matn4O89029 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC17.34■□□□□ 0.37
Matn4O89029 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Matn4O89029 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.37
Matn4O89029 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.37
Matn4O89029 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Matn4O89029 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.37
Matn4O89029 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.37
Matn4O89029 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Matn4O89029 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Matn4O89029 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC17.33■□□□□ 0.37
Matn4O89029 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Matn4O89029 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Matn4O89029 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Matn4O89029 Gm12821-201ENSMUST00000120022 600 ntBASIC17.33■□□□□ 0.36
Matn4O89029 Gm27454-201ENSMUST00000185090 204 ntBASIC17.33■□□□□ 0.36
Matn4O89029 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC17.33■□□□□ 0.36
Matn4O89029 CT010467.1-202ENSMUST00000205406 714 ntBASIC17.33■□□□□ 0.36
Matn4O89029 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
Matn4O89029 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC17.33■□□□□ 0.36
Matn4O89029 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Matn4O89029 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC17.33■□□□□ 0.36
Matn4O89029 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 29.6 ms