Protein–RNA interactions for Protein: O88967

Yme1l1, ATP-dependent zinc metalloprotease YME1L1, mousemouse

Known RBP Predictions only

Length 715 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Yme1l1O88967 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Yme1l1O88967 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Yme1l1O88967 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Yme1l1O88967 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Yme1l1O88967 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Yme1l1O88967 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Yme1l1O88967 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC19.28■□□□□ 0.68
Yme1l1O88967 Gm45560-201ENSMUST00000211492 1472 ntBASIC19.28■□□□□ 0.68
Yme1l1O88967 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Yme1l1O88967 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Yme1l1O88967 Gm8309-201ENSMUST00000206627 1448 ntBASIC19.27■□□□□ 0.68
Yme1l1O88967 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Yme1l1O88967 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Yme1l1O88967 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Yme1l1O88967 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Yme1l1O88967 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
Yme1l1O88967 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Yme1l1O88967 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC19.27■□□□□ 0.68
Yme1l1O88967 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
Yme1l1O88967 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC19.27■□□□□ 0.67
Yme1l1O88967 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Yme1l1O88967 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Yme1l1O88967 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Yme1l1O88967 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Yme1l1O88967 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
Yme1l1O88967 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC19.26■□□□□ 0.67
Yme1l1O88967 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
Yme1l1O88967 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Yme1l1O88967 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Yme1l1O88967 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Yme1l1O88967 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Yme1l1O88967 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
Yme1l1O88967 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
Yme1l1O88967 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Yme1l1O88967 Gm13559-201ENSMUST00000120476 863 ntBASIC19.25■□□□□ 0.67
Yme1l1O88967 Gm21362-201ENSMUST00000194272 928 ntBASIC19.25■□□□□ 0.67
Yme1l1O88967 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC19.25■□□□□ 0.67
Yme1l1O88967 Timm23-208ENSMUST00000226683 750 ntBASIC19.25■□□□□ 0.67
Yme1l1O88967 Odf3b-204ENSMUST00000227834 930 ntBASIC19.25■□□□□ 0.67
Yme1l1O88967 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC19.25■□□□□ 0.67
Yme1l1O88967 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Yme1l1O88967 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
Yme1l1O88967 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC19.25■□□□□ 0.67
Yme1l1O88967 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Yme1l1O88967 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Yme1l1O88967 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC19.25■□□□□ 0.67
Yme1l1O88967 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Yme1l1O88967 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Yme1l1O88967 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC19.25■□□□□ 0.67
Yme1l1O88967 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Yme1l1O88967 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Yme1l1O88967 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Yme1l1O88967 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC19.24■□□□□ 0.67
Yme1l1O88967 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
Yme1l1O88967 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC19.24■□□□□ 0.67
Yme1l1O88967 Gm11539-201ENSMUST00000119837 557 ntBASIC19.24■□□□□ 0.67
Yme1l1O88967 Gm13436-201ENSMUST00000120418 567 ntBASIC19.24■□□□□ 0.67
Yme1l1O88967 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Yme1l1O88967 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Yme1l1O88967 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC19.24■□□□□ 0.67
Yme1l1O88967 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC19.24■□□□□ 0.67
Yme1l1O88967 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Yme1l1O88967 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Yme1l1O88967 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
Yme1l1O88967 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Yme1l1O88967 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
Yme1l1O88967 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Yme1l1O88967 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC19.23■□□□□ 0.67
Yme1l1O88967 Gm12382-201ENSMUST00000122005 922 ntBASIC19.23■□□□□ 0.67
Yme1l1O88967 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
Yme1l1O88967 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC19.23■□□□□ 0.67
Yme1l1O88967 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC19.23■□□□□ 0.67
Yme1l1O88967 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Yme1l1O88967 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
Yme1l1O88967 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Yme1l1O88967 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Yme1l1O88967 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Yme1l1O88967 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Yme1l1O88967 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
Yme1l1O88967 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC19.23■□□□□ 0.67
Yme1l1O88967 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Yme1l1O88967 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
Yme1l1O88967 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Yme1l1O88967 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Yme1l1O88967 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Yme1l1O88967 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Yme1l1O88967 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Yme1l1O88967 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Yme1l1O88967 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC19.22■□□□□ 0.67
Yme1l1O88967 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
Yme1l1O88967 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC19.22■□□□□ 0.67
Yme1l1O88967 Gm37292-201ENSMUST00000192062 758 ntBASIC19.22■□□□□ 0.67
Yme1l1O88967 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC19.22■□□□□ 0.67
Yme1l1O88967 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Yme1l1O88967 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Yme1l1O88967 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Yme1l1O88967 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
Yme1l1O88967 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
Yme1l1O88967 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Yme1l1O88967 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 62.4 ms