Protein–RNA interactions for Protein: O88609

Lmx1b, LIM homeobox transcription factor 1-beta, mousemouse

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lmx1bO88609 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC16.64■□□□□ 0.25
Lmx1bO88609 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC16.64■□□□□ 0.25
Lmx1bO88609 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Lmx1bO88609 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Lmx1bO88609 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Lmx1bO88609 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC16.64■□□□□ 0.25
Lmx1bO88609 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Lmx1bO88609 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
Lmx1bO88609 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
Lmx1bO88609 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Lmx1bO88609 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Lmx1bO88609 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC16.63■□□□□ 0.25
Lmx1bO88609 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC16.63■□□□□ 0.25
Lmx1bO88609 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
Lmx1bO88609 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
Lmx1bO88609 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Lmx1bO88609 Gm27275-201ENSMUST00000184318 272 ntBASIC16.63■□□□□ 0.25
Lmx1bO88609 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
Lmx1bO88609 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Lmx1bO88609 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Lmx1bO88609 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
Lmx1bO88609 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Lmx1bO88609 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Lmx1bO88609 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
Lmx1bO88609 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
Lmx1bO88609 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
Lmx1bO88609 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Lmx1bO88609 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Lmx1bO88609 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Lmx1bO88609 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Lmx1bO88609 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Lmx1bO88609 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Lmx1bO88609 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
Lmx1bO88609 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Lmx1bO88609 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC16.62■□□□□ 0.25
Lmx1bO88609 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC16.62■□□□□ 0.25
Lmx1bO88609 Gm8520-201ENSMUST00000186517 868 ntBASIC16.62■□□□□ 0.25
Lmx1bO88609 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC16.62■□□□□ 0.25
Lmx1bO88609 Gm44878-201ENSMUST00000205812 1295 ntBASIC16.62■□□□□ 0.25
Lmx1bO88609 AC124603.1-201ENSMUST00000223843 308 ntBASIC16.62■□□□□ 0.25
Lmx1bO88609 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC16.62■□□□□ 0.25
Lmx1bO88609 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC16.62■□□□□ 0.25
Lmx1bO88609 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Lmx1bO88609 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Lmx1bO88609 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Lmx1bO88609 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Lmx1bO88609 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Lmx1bO88609 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC16.62■□□□□ 0.25
Lmx1bO88609 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Lmx1bO88609 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Lmx1bO88609 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Lmx1bO88609 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Lmx1bO88609 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Lmx1bO88609 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
Lmx1bO88609 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Lmx1bO88609 Gm12896-201ENSMUST00000118430 226 ntBASIC16.61■□□□□ 0.25
Lmx1bO88609 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Lmx1bO88609 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
Lmx1bO88609 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Lmx1bO88609 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Lmx1bO88609 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Lmx1bO88609 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Lmx1bO88609 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Lmx1bO88609 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Lmx1bO88609 Gm43672-201ENSMUST00000199072 1731 ntBASIC16.6■□□□□ 0.25
Lmx1bO88609 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC16.6■□□□□ 0.25
Lmx1bO88609 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
Lmx1bO88609 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Lmx1bO88609 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC16.6■□□□□ 0.25
Lmx1bO88609 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Lmx1bO88609 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
Lmx1bO88609 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Lmx1bO88609 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Lmx1bO88609 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Lmx1bO88609 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Lmx1bO88609 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Lmx1bO88609 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
Lmx1bO88609 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Lmx1bO88609 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC16.59■□□□□ 0.25
Lmx1bO88609 BC021767-201ENSMUST00000126387 1716 ntBASIC16.59■□□□□ 0.25
Lmx1bO88609 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Lmx1bO88609 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Lmx1bO88609 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Lmx1bO88609 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Lmx1bO88609 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Lmx1bO88609 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
Lmx1bO88609 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Lmx1bO88609 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Lmx1bO88609 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Lmx1bO88609 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC16.59■□□□□ 0.25
Lmx1bO88609 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC16.59■□□□□ 0.25
Lmx1bO88609 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Lmx1bO88609 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
Lmx1bO88609 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC16.59■□□□□ 0.25
Lmx1bO88609 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Lmx1bO88609 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC16.59■□□□□ 0.25
Lmx1bO88609 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Lmx1bO88609 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Lmx1bO88609 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Lmx1bO88609 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC16.58■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 24.5 ms