Protein–RNA interactions for Protein: O88427

Cacna1h, Voltage-dependent T-type calcium channel subunit alpha-1H, mousemouse

Predictions only

Length 2,365 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1hO88427 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Cacna1hO88427 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Cacna1hO88427 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC18■□□□□ 0.47
Cacna1hO88427 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Cacna1hO88427 Fgf20-202ENSMUST00000118639 587 ntTSL 3 BASIC17.99■□□□□ 0.47
Cacna1hO88427 Gm43073-201ENSMUST00000198200 1189 ntBASIC17.99■□□□□ 0.47
Cacna1hO88427 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Cacna1hO88427 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Cacna1hO88427 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
Cacna1hO88427 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC17.99■□□□□ 0.47
Cacna1hO88427 Gm27525-201ENSMUST00000184465 107 ntBASIC17.99■□□□□ 0.47
Cacna1hO88427 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Cacna1hO88427 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Cacna1hO88427 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Cacna1hO88427 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Cacna1hO88427 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Cacna1hO88427 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
Cacna1hO88427 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Cacna1hO88427 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Cacna1hO88427 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
Cacna1hO88427 Kxd1-202ENSMUST00000117580 696 ntTSL 5 BASIC17.98■□□□□ 0.47
Cacna1hO88427 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Cacna1hO88427 AC154621.1-201ENSMUST00000226155 1119 ntBASIC17.98■□□□□ 0.47
Cacna1hO88427 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Cacna1hO88427 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Cacna1hO88427 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC17.98■□□□□ 0.47
Cacna1hO88427 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Cacna1hO88427 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
Cacna1hO88427 Tm6sf2-201ENSMUST00000049197 1418 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
Cacna1hO88427 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Cacna1hO88427 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Cacna1hO88427 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
Cacna1hO88427 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Cacna1hO88427 Mir6349-201ENSMUST00000184059 97 ntBASIC17.97■□□□□ 0.47
Cacna1hO88427 4930519L02Rik-201ENSMUST00000197683 619 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Cacna1hO88427 Gm2270-201ENSMUST00000222858 797 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Cacna1hO88427 Birc2-201ENSMUST00000054878 378 ntBASIC17.97■□□□□ 0.47
Cacna1hO88427 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Cacna1hO88427 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Cacna1hO88427 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Cacna1hO88427 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Cacna1hO88427 H2-T-ps-201ENSMUST00000172538 1067 ntBASIC17.97■□□□□ 0.47
Cacna1hO88427 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Cacna1hO88427 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Cacna1hO88427 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC17.97■□□□□ 0.47
Cacna1hO88427 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Cacna1hO88427 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC17.97■□□□□ 0.47
Cacna1hO88427 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
Cacna1hO88427 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC17.96■□□□□ 0.47
Cacna1hO88427 Gm16061-201ENSMUST00000122167 857 ntBASIC17.96■□□□□ 0.47
Cacna1hO88427 Gm27459-201ENSMUST00000184860 107 ntBASIC17.96■□□□□ 0.47
Cacna1hO88427 Gm17808-201ENSMUST00000200859 894 ntBASIC17.96■□□□□ 0.47
Cacna1hO88427 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Cacna1hO88427 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Cacna1hO88427 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Cacna1hO88427 Prss45-202ENSMUST00000146794 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Cacna1hO88427 Gm26661-201ENSMUST00000181025 471 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
Cacna1hO88427 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC17.96■□□□□ 0.47
Cacna1hO88427 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
Cacna1hO88427 Bcl7b-203ENSMUST00000111188 1434 ntAPPRIS ALT1 TSL 5 BASIC17.95■□□□□ 0.46
Cacna1hO88427 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC17.95■□□□□ 0.46
Cacna1hO88427 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
Cacna1hO88427 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC17.95■□□□□ 0.46
Cacna1hO88427 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Cacna1hO88427 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Cacna1hO88427 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Cacna1hO88427 Lrrc25-201ENSMUST00000052437 1313 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Cacna1hO88427 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Cacna1hO88427 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
Cacna1hO88427 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Cacna1hO88427 Anxa2-201ENSMUST00000034756 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Cacna1hO88427 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Cacna1hO88427 1600014C10Rik-209ENSMUST00000179992 568 ntTSL 3 BASIC17.95■□□□□ 0.46
Cacna1hO88427 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC17.95■□□□□ 0.46
Cacna1hO88427 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Cacna1hO88427 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Cacna1hO88427 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Cacna1hO88427 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Cacna1hO88427 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Cacna1hO88427 Mir8098-201ENSMUST00000184011 137 ntBASIC17.94■□□□□ 0.46
Cacna1hO88427 AC132104.2-201ENSMUST00000215011 266 ntBASIC17.94■□□□□ 0.46
Cacna1hO88427 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
Cacna1hO88427 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Cacna1hO88427 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Cacna1hO88427 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Cacna1hO88427 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Cacna1hO88427 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC17.94■□□□□ 0.46
Cacna1hO88427 Rnf186-201ENSMUST00000116094 1249 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
Cacna1hO88427 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Cacna1hO88427 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC17.94■□□□□ 0.46
Cacna1hO88427 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Cacna1hO88427 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC17.94■□□□□ 0.46
Cacna1hO88427 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Cacna1hO88427 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Cacna1hO88427 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC17.93■□□□□ 0.46
Cacna1hO88427 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC17.93■□□□□ 0.46
Cacna1hO88427 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Cacna1hO88427 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Cacna1hO88427 Gm10654-201ENSMUST00000098653 1633 ntBASIC17.93■□□□□ 0.46
Cacna1hO88427 Inip-202ENSMUST00000107526 1438 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 15.4 ms