Protein–RNA interactions for Protein: O70258

Sgce, Epsilon-sarcoglycan, mousemouse

Predictions only

Length 437 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgceO70258 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
SgceO70258 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
SgceO70258 Gm6627-201ENSMUST00000218299 2386 ntBASIC16.43■□□□□ 0.22
SgceO70258 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
SgceO70258 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
SgceO70258 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC16.43■□□□□ 0.22
SgceO70258 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
SgceO70258 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
SgceO70258 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
SgceO70258 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
SgceO70258 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
SgceO70258 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
SgceO70258 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
SgceO70258 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
SgceO70258 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
SgceO70258 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
SgceO70258 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
SgceO70258 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
SgceO70258 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC16.42■□□□□ 0.22
SgceO70258 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC16.42■□□□□ 0.22
SgceO70258 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
SgceO70258 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
SgceO70258 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
SgceO70258 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
SgceO70258 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
SgceO70258 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC16.42■□□□□ 0.22
SgceO70258 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
SgceO70258 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SgceO70258 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SgceO70258 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SgceO70258 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
SgceO70258 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SgceO70258 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
SgceO70258 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SgceO70258 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
SgceO70258 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SgceO70258 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SgceO70258 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
SgceO70258 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC16.41■□□□□ 0.22
SgceO70258 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SgceO70258 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC16.41■□□□□ 0.22
SgceO70258 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SgceO70258 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
SgceO70258 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC16.41■□□□□ 0.22
SgceO70258 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SgceO70258 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
SgceO70258 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
SgceO70258 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC16.41■□□□□ 0.22
SgceO70258 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
SgceO70258 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SgceO70258 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
SgceO70258 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SgceO70258 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
SgceO70258 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC16.41■□□□□ 0.22
SgceO70258 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SgceO70258 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
SgceO70258 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SgceO70258 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SgceO70258 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
SgceO70258 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SgceO70258 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SgceO70258 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
SgceO70258 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SgceO70258 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
SgceO70258 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
SgceO70258 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC16.4■□□□□ 0.22
SgceO70258 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
SgceO70258 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SgceO70258 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SgceO70258 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SgceO70258 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC16.39■□□□□ 0.22
SgceO70258 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC16.39■□□□□ 0.22
SgceO70258 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SgceO70258 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
SgceO70258 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
SgceO70258 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SgceO70258 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC16.39■□□□□ 0.21
SgceO70258 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SgceO70258 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC16.39■□□□□ 0.21
SgceO70258 Gm5874-201ENSMUST00000096101 508 ntBASIC16.39■□□□□ 0.21
SgceO70258 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
SgceO70258 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
SgceO70258 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
SgceO70258 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SgceO70258 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SgceO70258 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
SgceO70258 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SgceO70258 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SgceO70258 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
SgceO70258 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
SgceO70258 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC16.38■□□□□ 0.21
SgceO70258 Gm13534-201ENSMUST00000121169 513 ntBASIC16.38■□□□□ 0.21
SgceO70258 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SgceO70258 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC16.38■□□□□ 0.21
SgceO70258 Gm26971-201ENSMUST00000182423 1072 ntBASIC16.38■□□□□ 0.21
SgceO70258 Gm19094-201ENSMUST00000209791 1246 ntBASIC16.38■□□□□ 0.21
SgceO70258 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SgceO70258 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC16.38■□□□□ 0.21
SgceO70258 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SgceO70258 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 30.1 ms