Protein–RNA interactions for Protein: O70138

Mmp8, Neutrophil collagenase, mousemouse

Predictions only

Length 465 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp8O70138 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC22.52■■□□□ 1.2
Mmp8O70138 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Mmp8O70138 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC22.52■■□□□ 1.2
Mmp8O70138 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Mmp8O70138 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
Mmp8O70138 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC22.51■■□□□ 1.19
Mmp8O70138 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC22.51■■□□□ 1.19
Mmp8O70138 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Mmp8O70138 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC22.51■■□□□ 1.19
Mmp8O70138 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC22.51■■□□□ 1.19
Mmp8O70138 Gm29257-201ENSMUST00000186115 639 ntBASIC22.51■■□□□ 1.19
Mmp8O70138 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC22.51■■□□□ 1.19
Mmp8O70138 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC22.51■■□□□ 1.19
Mmp8O70138 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC22.51■■□□□ 1.19
Mmp8O70138 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Mmp8O70138 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC22.5■■□□□ 1.19
Mmp8O70138 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC22.5■■□□□ 1.19
Mmp8O70138 AC140264.2-202ENSMUST00000218746 817 ntBASIC22.5■■□□□ 1.19
Mmp8O70138 Gm4968-201ENSMUST00000071458 858 ntBASIC22.5■■□□□ 1.19
Mmp8O70138 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC22.5■■□□□ 1.19
Mmp8O70138 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC22.5■■□□□ 1.19
Mmp8O70138 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Mmp8O70138 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
Mmp8O70138 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC22.5■■□□□ 1.19
Mmp8O70138 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
Mmp8O70138 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC22.49■■□□□ 1.19
Mmp8O70138 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Mmp8O70138 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Mmp8O70138 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
Mmp8O70138 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
Mmp8O70138 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC22.49■■□□□ 1.19
Mmp8O70138 Gm5408-201ENSMUST00000197998 747 ntBASIC22.49■■□□□ 1.19
Mmp8O70138 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC22.49■■□□□ 1.19
Mmp8O70138 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
Mmp8O70138 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
Mmp8O70138 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC22.49■■□□□ 1.19
Mmp8O70138 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Mmp8O70138 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
Mmp8O70138 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC22.48■■□□□ 1.19
Mmp8O70138 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC22.48■■□□□ 1.19
Mmp8O70138 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Mmp8O70138 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
Mmp8O70138 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC22.48■■□□□ 1.19
Mmp8O70138 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Mmp8O70138 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Mmp8O70138 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC22.48■■□□□ 1.19
Mmp8O70138 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC22.48■■□□□ 1.19
Mmp8O70138 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC22.48■■□□□ 1.19
Mmp8O70138 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC22.48■■□□□ 1.19
Mmp8O70138 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Mmp8O70138 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC22.47■■□□□ 1.19
Mmp8O70138 Gm44549-201ENSMUST00000208351 577 ntBASIC22.47■■□□□ 1.19
Mmp8O70138 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Mmp8O70138 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
Mmp8O70138 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC22.47■■□□□ 1.19
Mmp8O70138 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Mmp8O70138 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Mmp8O70138 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC22.46■■□□□ 1.19
Mmp8O70138 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC22.46■■□□□ 1.19
Mmp8O70138 Gm3807-201ENSMUST00000193520 1168 ntBASIC22.46■■□□□ 1.19
Mmp8O70138 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Mmp8O70138 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Mmp8O70138 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Mmp8O70138 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
Mmp8O70138 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Mmp8O70138 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC22.46■■□□□ 1.19
Mmp8O70138 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Mmp8O70138 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC22.45■■□□□ 1.19
Mmp8O70138 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC22.45■■□□□ 1.19
Mmp8O70138 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC22.45■■□□□ 1.19
Mmp8O70138 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
Mmp8O70138 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
Mmp8O70138 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC22.45■■□□□ 1.18
Mmp8O70138 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC22.45■■□□□ 1.18
Mmp8O70138 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC22.45■■□□□ 1.18
Mmp8O70138 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
Mmp8O70138 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
Mmp8O70138 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC22.45■■□□□ 1.18
Mmp8O70138 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
Mmp8O70138 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC22.45■■□□□ 1.18
Mmp8O70138 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC22.45■■□□□ 1.18
Mmp8O70138 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC22.45■■□□□ 1.18
Mmp8O70138 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC22.44■■□□□ 1.18
Mmp8O70138 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC22.44■■□□□ 1.18
Mmp8O70138 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
Mmp8O70138 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC22.44■■□□□ 1.18
Mmp8O70138 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC22.44■■□□□ 1.18
Mmp8O70138 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC22.44■■□□□ 1.18
Mmp8O70138 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC22.44■■□□□ 1.18
Mmp8O70138 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC22.43■■□□□ 1.18
Mmp8O70138 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC22.43■■□□□ 1.18
Mmp8O70138 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC22.43■■□□□ 1.18
Mmp8O70138 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Mmp8O70138 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Mmp8O70138 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC22.43■■□□□ 1.18
Mmp8O70138 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
Mmp8O70138 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
Mmp8O70138 Gm44672-201ENSMUST00000206944 1098 ntBASIC22.43■■□□□ 1.18
Mmp8O70138 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC22.43■■□□□ 1.18
Mmp8O70138 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC22.43■■□□□ 1.18
Retrieved 100 of 76,532 protein–RNA pairs in 21.4 ms