Protein–RNA interactions for Protein: O54965

Rnf13, E3 ubiquitin-protein ligase RNF13, mousemouse

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf13O54965 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Rnf13O54965 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Rnf13O54965 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Rnf13O54965 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Rnf13O54965 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC16.68■□□□□ 0.26
Rnf13O54965 Gm13241-201ENSMUST00000094493 780 ntBASIC16.68■□□□□ 0.26
Rnf13O54965 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Rnf13O54965 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
Rnf13O54965 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC16.68■□□□□ 0.26
Rnf13O54965 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Rnf13O54965 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Rnf13O54965 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC16.68■□□□□ 0.26
Rnf13O54965 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
Rnf13O54965 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Rnf13O54965 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC16.67■□□□□ 0.26
Rnf13O54965 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Rnf13O54965 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Rnf13O54965 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Rnf13O54965 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
Rnf13O54965 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Rnf13O54965 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Rnf13O54965 Gm11421-201ENSMUST00000122124 294 ntBASIC16.67■□□□□ 0.26
Rnf13O54965 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC16.67■□□□□ 0.26
Rnf13O54965 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Rnf13O54965 CT030146.1-201ENSMUST00000220919 217 ntBASIC16.67■□□□□ 0.26
Rnf13O54965 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
Rnf13O54965 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
Rnf13O54965 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Rnf13O54965 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Rnf13O54965 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC16.67■□□□□ 0.26
Rnf13O54965 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Rnf13O54965 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Rnf13O54965 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Rnf13O54965 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Rnf13O54965 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC16.66■□□□□ 0.26
Rnf13O54965 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Rnf13O54965 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
Rnf13O54965 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Rnf13O54965 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Rnf13O54965 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC16.66■□□□□ 0.26
Rnf13O54965 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Rnf13O54965 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Rnf13O54965 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Rnf13O54965 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Rnf13O54965 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Rnf13O54965 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Rnf13O54965 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Rnf13O54965 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Rnf13O54965 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Rnf13O54965 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Rnf13O54965 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
Rnf13O54965 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Rnf13O54965 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Rnf13O54965 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC16.65■□□□□ 0.26
Rnf13O54965 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
Rnf13O54965 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Rnf13O54965 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC16.65■□□□□ 0.26
Rnf13O54965 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Rnf13O54965 Smad6-203ENSMUST00000179458 273 ntBASIC16.65■□□□□ 0.26
Rnf13O54965 Mir7075-201ENSMUST00000184187 82 ntBASIC16.65■□□□□ 0.26
Rnf13O54965 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Rnf13O54965 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Rnf13O54965 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Rnf13O54965 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Rnf13O54965 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
Rnf13O54965 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Rnf13O54965 Gm43034-201ENSMUST00000198678 1364 ntBASIC16.64■□□□□ 0.26
Rnf13O54965 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Rnf13O54965 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Rnf13O54965 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC16.64■□□□□ 0.25
Rnf13O54965 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC16.64■□□□□ 0.25
Rnf13O54965 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC16.64■□□□□ 0.25
Rnf13O54965 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Rnf13O54965 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC16.64■□□□□ 0.25
Rnf13O54965 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Rnf13O54965 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Rnf13O54965 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
Rnf13O54965 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Rnf13O54965 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
Rnf13O54965 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Rnf13O54965 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Rnf13O54965 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Rnf13O54965 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Rnf13O54965 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Rnf13O54965 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
Rnf13O54965 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Rnf13O54965 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Rnf13O54965 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
Rnf13O54965 Gm21956-201ENSMUST00000179946 522 ntBASIC16.63■□□□□ 0.25
Rnf13O54965 Gm27801-201ENSMUST00000184174 223 ntBASIC16.63■□□□□ 0.25
Rnf13O54965 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC16.63■□□□□ 0.25
Rnf13O54965 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Rnf13O54965 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Rnf13O54965 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Rnf13O54965 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Rnf13O54965 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Rnf13O54965 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
Rnf13O54965 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Rnf13O54965 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Rnf13O54965 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 29.2 ms