Protein–RNA interactions for Protein: O35900

Lsm2, U6 snRNA-associated Sm-like protein LSm2, mousemouse

Known RBP Predictions only

Length 95 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm2O35900 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Lsm2O35900 Gm9959-201ENSMUST00000068277 390 ntBASIC16.39■□□□□ 0.21
Lsm2O35900 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Lsm2O35900 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC16.39■□□□□ 0.21
Lsm2O35900 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Lsm2O35900 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Lsm2O35900 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Lsm2O35900 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Lsm2O35900 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Lsm2O35900 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Lsm2O35900 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Lsm2O35900 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Lsm2O35900 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Lsm2O35900 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Lsm2O35900 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Lsm2O35900 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Lsm2O35900 Gm45244-201ENSMUST00000211328 2200 ntBASIC16.38■□□□□ 0.21
Lsm2O35900 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Lsm2O35900 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
Lsm2O35900 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
Lsm2O35900 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC16.38■□□□□ 0.21
Lsm2O35900 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC16.38■□□□□ 0.21
Lsm2O35900 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
Lsm2O35900 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Lsm2O35900 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Lsm2O35900 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Lsm2O35900 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Lsm2O35900 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Lsm2O35900 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Lsm2O35900 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
Lsm2O35900 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Lsm2O35900 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Lsm2O35900 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Lsm2O35900 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Lsm2O35900 Dapk1-207ENSMUST00000226059 5009 ntBASIC16.37■□□□□ 0.21
Lsm2O35900 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
Lsm2O35900 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC16.37■□□□□ 0.21
Lsm2O35900 Spcs1-204ENSMUST00000226782 949 ntBASIC16.37■□□□□ 0.21
Lsm2O35900 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Lsm2O35900 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC16.37■□□□□ 0.21
Lsm2O35900 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
Lsm2O35900 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Lsm2O35900 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Lsm2O35900 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Lsm2O35900 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Lsm2O35900 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Lsm2O35900 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC16.36■□□□□ 0.21
Lsm2O35900 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
Lsm2O35900 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Lsm2O35900 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Lsm2O35900 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
Lsm2O35900 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
Lsm2O35900 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Lsm2O35900 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Lsm2O35900 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Lsm2O35900 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
Lsm2O35900 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
Lsm2O35900 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC16.36■□□□□ 0.21
Lsm2O35900 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
Lsm2O35900 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Lsm2O35900 Tgds-204ENSMUST00000228543 1594 ntBASIC16.35■□□□□ 0.21
Lsm2O35900 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Lsm2O35900 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Lsm2O35900 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Lsm2O35900 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Lsm2O35900 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC16.35■□□□□ 0.21
Lsm2O35900 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Lsm2O35900 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Lsm2O35900 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
Lsm2O35900 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Lsm2O35900 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Lsm2O35900 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Lsm2O35900 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Lsm2O35900 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
Lsm2O35900 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Lsm2O35900 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Lsm2O35900 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC16.34■□□□□ 0.21
Lsm2O35900 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Lsm2O35900 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Lsm2O35900 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC16.34■□□□□ 0.21
Lsm2O35900 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC16.34■□□□□ 0.21
Lsm2O35900 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
Lsm2O35900 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Lsm2O35900 AC107452.1-201ENSMUST00000227963 481 ntBASIC16.34■□□□□ 0.21
Lsm2O35900 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Lsm2O35900 Gm5812-201ENSMUST00000061073 957 ntBASIC16.34■□□□□ 0.21
Lsm2O35900 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Lsm2O35900 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
Lsm2O35900 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Lsm2O35900 AC165080.2-201ENSMUST00000217491 1530 ntBASIC16.34■□□□□ 0.21
Lsm2O35900 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Lsm2O35900 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Lsm2O35900 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Lsm2O35900 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Lsm2O35900 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Lsm2O35900 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Lsm2O35900 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Lsm2O35900 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
Lsm2O35900 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Lsm2O35900 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 39.1 ms