Protein–RNA interactions for Protein: O35600

Abca4, Retinal-specific ATP-binding cassette transporter, mousemouse

Predictions only

Length 2,310 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abca4O35600 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Abca4O35600 Anxa2-201ENSMUST00000034756 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Abca4O35600 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Abca4O35600 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Abca4O35600 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC17.36■□□□□ 0.37
Abca4O35600 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Abca4O35600 Gm16061-201ENSMUST00000122167 857 ntBASIC17.36■□□□□ 0.37
Abca4O35600 Gm11906-201ENSMUST00000124792 680 ntTSL 5 BASIC17.36■□□□□ 0.37
Abca4O35600 Smim4-204ENSMUST00000203261 1219 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Abca4O35600 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Abca4O35600 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Abca4O35600 Commd6-201ENSMUST00000100339 1090 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
Abca4O35600 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC17.36■□□□□ 0.37
Abca4O35600 Sirpa-213ENSMUST00000163034 677 ntTSL 3 BASIC17.36■□□□□ 0.37
Abca4O35600 Gm38285-201ENSMUST00000192928 922 ntBASIC17.36■□□□□ 0.37
Abca4O35600 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Abca4O35600 Gm21559-201ENSMUST00000220638 855 ntBASIC17.36■□□□□ 0.37
Abca4O35600 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
Abca4O35600 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
Abca4O35600 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Abca4O35600 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Abca4O35600 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
Abca4O35600 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
Abca4O35600 Gm12085-201ENSMUST00000119263 940 ntBASIC17.35■□□□□ 0.37
Abca4O35600 Gm28659-201ENSMUST00000188013 759 ntBASIC17.35■□□□□ 0.37
Abca4O35600 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Abca4O35600 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Abca4O35600 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC17.35■□□□□ 0.37
Abca4O35600 Psma3-204ENSMUST00000160864 859 ntTSL 5 BASIC17.35■□□□□ 0.37
Abca4O35600 Tnnt2-205ENSMUST00000178204 1172 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
Abca4O35600 Tnnt2-207ENSMUST00000179863 1097 ntAPPRIS P4 TSL 5 BASIC17.35■□□□□ 0.37
Abca4O35600 Tnnt2-209ENSMUST00000188028 1200 ntAPPRIS P4 TSL 5 BASIC17.35■□□□□ 0.37
Abca4O35600 AC166341.7-201ENSMUST00000221698 126 ntBASIC17.35■□□□□ 0.37
Abca4O35600 Otx2os1-206ENSMUST00000228153 787 ntBASIC17.35■□□□□ 0.37
Abca4O35600 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Abca4O35600 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Abca4O35600 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Abca4O35600 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Abca4O35600 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Abca4O35600 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC17.34■□□□□ 0.37
Abca4O35600 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC17.34■□□□□ 0.37
Abca4O35600 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Abca4O35600 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Abca4O35600 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Abca4O35600 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC17.33■□□□□ 0.37
Abca4O35600 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
Abca4O35600 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC17.33■□□□□ 0.36
Abca4O35600 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Abca4O35600 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Abca4O35600 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Abca4O35600 Dgcr6-202ENSMUST00000076757 894 ntTSL 5 BASIC17.33■□□□□ 0.36
Abca4O35600 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
Abca4O35600 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Abca4O35600 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Abca4O35600 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
Abca4O35600 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Abca4O35600 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC17.32■□□□□ 0.36
Abca4O35600 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC17.32■□□□□ 0.36
Abca4O35600 Gm15492-201ENSMUST00000156734 606 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Abca4O35600 Ino80dos-204ENSMUST00000188602 678 ntTSL 2 BASIC17.32■□□□□ 0.36
Abca4O35600 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Abca4O35600 AC159093.1-201ENSMUST00000227779 380 ntBASIC17.32■□□□□ 0.36
Abca4O35600 Cklf-201ENSMUST00000034342 667 ntAPPRIS P4 TSL 1 (best) BASIC17.32■□□□□ 0.36
Abca4O35600 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Abca4O35600 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Abca4O35600 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Abca4O35600 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Abca4O35600 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Abca4O35600 Gm18206-201ENSMUST00000207027 926 ntBASIC17.32■□□□□ 0.36
Abca4O35600 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC17.32■□□□□ 0.36
Abca4O35600 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Abca4O35600 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Abca4O35600 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Abca4O35600 Ybx2-202ENSMUST00000108601 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Abca4O35600 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Abca4O35600 Gm27357-201ENSMUST00000183754 135 ntBASIC17.31■□□□□ 0.36
Abca4O35600 AC148328.1-201ENSMUST00000216448 920 ntTSL 5 BASIC17.31■□□□□ 0.36
Abca4O35600 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Abca4O35600 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Abca4O35600 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Abca4O35600 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Abca4O35600 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Abca4O35600 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Abca4O35600 Rnf186-201ENSMUST00000116094 1249 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
Abca4O35600 Dynlt1b-201ENSMUST00000179569 768 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Abca4O35600 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Abca4O35600 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Abca4O35600 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Abca4O35600 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Abca4O35600 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
Abca4O35600 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
Abca4O35600 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
Abca4O35600 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC17.3■□□□□ 0.36
Abca4O35600 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Abca4O35600 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Abca4O35600 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Abca4O35600 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
Abca4O35600 Rnf141-201ENSMUST00000106682 1101 ntAPPRIS P1 TSL 3 BASIC17.3■□□□□ 0.36
Abca4O35600 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Abca4O35600 Spsb2-203ENSMUST00000112473 1322 ntBASIC17.29■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 30.3 ms