Protein–RNA interactions for Protein: O35206

Col15a1, Collagen alpha-1(XV) chain, mousemouse

Predictions only

Length 1,367 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col15a1O35206 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC23.77■■□□□ 1.4
Col15a1O35206 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
Col15a1O35206 Mir6349-201ENSMUST00000184059 97 ntBASIC23.77■■□□□ 1.4
Col15a1O35206 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC23.77■■□□□ 1.4
Col15a1O35206 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC23.77■■□□□ 1.4
Col15a1O35206 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Col15a1O35206 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC23.77■■□□□ 1.4
Col15a1O35206 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
Col15a1O35206 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Col15a1O35206 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Col15a1O35206 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC23.77■■□□□ 1.39
Col15a1O35206 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Col15a1O35206 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Col15a1O35206 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC23.76■■□□□ 1.39
Col15a1O35206 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
Col15a1O35206 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
Col15a1O35206 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Col15a1O35206 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC23.76■■□□□ 1.39
Col15a1O35206 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC23.76■■□□□ 1.39
Col15a1O35206 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
Col15a1O35206 Lmbrd1-202ENSMUST00000186096 688 ntTSL 2 BASIC23.76■■□□□ 1.39
Col15a1O35206 AC166341.7-201ENSMUST00000221698 126 ntBASIC23.76■■□□□ 1.39
Col15a1O35206 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Col15a1O35206 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Col15a1O35206 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC23.76■■□□□ 1.39
Col15a1O35206 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC23.75■■□□□ 1.39
Col15a1O35206 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC23.75■■□□□ 1.39
Col15a1O35206 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
Col15a1O35206 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
Col15a1O35206 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Col15a1O35206 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Col15a1O35206 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Col15a1O35206 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC23.75■■□□□ 1.39
Col15a1O35206 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
Col15a1O35206 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
Col15a1O35206 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
Col15a1O35206 Gm44544-201ENSMUST00000207052 1844 ntBASIC23.74■■□□□ 1.39
Col15a1O35206 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
Col15a1O35206 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
Col15a1O35206 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC23.74■■□□□ 1.39
Col15a1O35206 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
Col15a1O35206 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
Col15a1O35206 Gm10654-201ENSMUST00000098653 1633 ntBASIC23.74■■□□□ 1.39
Col15a1O35206 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
Col15a1O35206 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
Col15a1O35206 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC23.74■■□□□ 1.39
Col15a1O35206 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC23.74■■□□□ 1.39
Col15a1O35206 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
Col15a1O35206 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC23.74■■□□□ 1.39
Col15a1O35206 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC23.74■■□□□ 1.39
Col15a1O35206 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC23.74■■□□□ 1.39
Col15a1O35206 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
Col15a1O35206 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Col15a1O35206 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Col15a1O35206 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Col15a1O35206 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Col15a1O35206 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
Col15a1O35206 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Col15a1O35206 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
Col15a1O35206 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Col15a1O35206 Gm12382-201ENSMUST00000122005 922 ntBASIC23.73■■□□□ 1.39
Col15a1O35206 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
Col15a1O35206 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
Col15a1O35206 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Col15a1O35206 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC23.73■■□□□ 1.39
Col15a1O35206 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Col15a1O35206 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
Col15a1O35206 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC23.73■■□□□ 1.39
Col15a1O35206 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Col15a1O35206 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC23.73■■□□□ 1.39
Col15a1O35206 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC23.73■■□□□ 1.39
Col15a1O35206 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC23.73■■□□□ 1.39
Col15a1O35206 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
Col15a1O35206 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
Col15a1O35206 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
Col15a1O35206 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC23.72■■□□□ 1.39
Col15a1O35206 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC23.72■■□□□ 1.39
Col15a1O35206 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC23.72■■□□□ 1.39
Col15a1O35206 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC23.71■■□□□ 1.39
Col15a1O35206 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC23.71■■□□□ 1.39
Col15a1O35206 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
Col15a1O35206 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
Col15a1O35206 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
Col15a1O35206 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC23.7■■□□□ 1.39
Col15a1O35206 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
Col15a1O35206 Gm6659-201ENSMUST00000174752 547 ntBASIC23.7■■□□□ 1.38
Col15a1O35206 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC23.7■■□□□ 1.38
Col15a1O35206 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC23.7■■□□□ 1.38
Col15a1O35206 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC23.7■■□□□ 1.38
Col15a1O35206 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
Col15a1O35206 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
Col15a1O35206 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
Col15a1O35206 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
Col15a1O35206 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
Col15a1O35206 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC23.69■■□□□ 1.38
Col15a1O35206 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
Col15a1O35206 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC23.69■■□□□ 1.38
Col15a1O35206 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC23.68■■□□□ 1.38
Col15a1O35206 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC23.68■■□□□ 1.38
Col15a1O35206 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
Retrieved 100 of 76,532 protein–RNA pairs in 16.7 ms