Protein–RNA interactions for Protein: O35114

Scarb2, Lysosome membrane protein 2, mousemouse

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scarb2O35114 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
Scarb2O35114 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC17.16■□□□□ 0.34
Scarb2O35114 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Scarb2O35114 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Scarb2O35114 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC17.16■□□□□ 0.34
Scarb2O35114 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC17.16■□□□□ 0.34
Scarb2O35114 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC17.15■□□□□ 0.34
Scarb2O35114 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC17.15■□□□□ 0.34
Scarb2O35114 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Scarb2O35114 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Scarb2O35114 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Scarb2O35114 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
Scarb2O35114 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Scarb2O35114 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Scarb2O35114 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC17.15■□□□□ 0.34
Scarb2O35114 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
Scarb2O35114 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC17.15■□□□□ 0.34
Scarb2O35114 Gm10167-201ENSMUST00000150411 1479 ntBASIC17.15■□□□□ 0.34
Scarb2O35114 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
Scarb2O35114 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Scarb2O35114 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Scarb2O35114 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Scarb2O35114 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
Scarb2O35114 Gm45906-201ENSMUST00000208911 1430 ntBASIC17.14■□□□□ 0.33
Scarb2O35114 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC17.14■□□□□ 0.33
Scarb2O35114 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
Scarb2O35114 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Scarb2O35114 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Scarb2O35114 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
Scarb2O35114 Gm13534-201ENSMUST00000121169 513 ntBASIC17.14■□□□□ 0.33
Scarb2O35114 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Scarb2O35114 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Scarb2O35114 Gm42778-201ENSMUST00000199644 553 ntBASIC17.14■□□□□ 0.33
Scarb2O35114 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC17.14■□□□□ 0.33
Scarb2O35114 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Scarb2O35114 Gm10493-201ENSMUST00000097270 612 ntBASIC17.14■□□□□ 0.33
Scarb2O35114 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Scarb2O35114 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Scarb2O35114 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Scarb2O35114 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Scarb2O35114 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Scarb2O35114 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Scarb2O35114 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Scarb2O35114 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
Scarb2O35114 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC17.13■□□□□ 0.33
Scarb2O35114 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Scarb2O35114 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Scarb2O35114 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Scarb2O35114 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Scarb2O35114 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Scarb2O35114 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Scarb2O35114 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
Scarb2O35114 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Scarb2O35114 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Scarb2O35114 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Scarb2O35114 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Scarb2O35114 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Scarb2O35114 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC17.12■□□□□ 0.33
Scarb2O35114 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Scarb2O35114 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Scarb2O35114 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Scarb2O35114 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC17.12■□□□□ 0.33
Scarb2O35114 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Scarb2O35114 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC17.12■□□□□ 0.33
Scarb2O35114 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Scarb2O35114 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Scarb2O35114 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Scarb2O35114 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Scarb2O35114 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Scarb2O35114 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC17.12■□□□□ 0.33
Scarb2O35114 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Scarb2O35114 Dmtn-210ENSMUST00000228824 2377 ntBASIC17.11■□□□□ 0.33
Scarb2O35114 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Scarb2O35114 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Scarb2O35114 Gm43213-201ENSMUST00000151866 1790 ntBASIC17.11■□□□□ 0.33
Scarb2O35114 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Scarb2O35114 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Scarb2O35114 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Scarb2O35114 AC099934.2-201ENSMUST00000196389 70 ntBASIC17.11■□□□□ 0.33
Scarb2O35114 AC156953.1-201ENSMUST00000196953 70 ntBASIC17.11■□□□□ 0.33
Scarb2O35114 AC157822.2-201ENSMUST00000200291 70 ntBASIC17.11■□□□□ 0.33
Scarb2O35114 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Scarb2O35114 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Scarb2O35114 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC17.11■□□□□ 0.33
Scarb2O35114 Gm42922-201ENSMUST00000195887 2078 ntBASIC17.11■□□□□ 0.33
Scarb2O35114 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Scarb2O35114 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Scarb2O35114 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Scarb2O35114 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Scarb2O35114 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Scarb2O35114 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Scarb2O35114 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC17.1■□□□□ 0.33
Scarb2O35114 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Scarb2O35114 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Scarb2O35114 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Scarb2O35114 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Scarb2O35114 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Scarb2O35114 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC17.1■□□□□ 0.33
Scarb2O35114 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Scarb2O35114 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 31.4 ms